RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GPR65Q8IYL9 337 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 BPIFB2Q8N4F0 458 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 Q8N9G6 341 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 FADS6Q8N9I5 356 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 NANPQ8TBE9 248 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 C18orf25Q96B23 403 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 VPS35Q96QK1 796 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 SLC30A2Q9BRI3 323 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 DPH7Q9BTV6 452 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 COQ10BQ9H8M1 238 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 EPS15L1Q9UBC2 864 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 SLC2A6Q9UGQ3 507 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 RSPH14Q9UHP6 348 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 MFHAS1Q9Y4C4 1052 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 GMPPBQ9Y5P6 360 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 USP16Q9Y5T5 823 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 AP4B1Q9Y6B7 739 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 A0A1B0GWJ7 208 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 CTAGE5O15320 804 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 GPAA1O43292 621 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 DUX1O43812 170 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 EFNA2O43921 213 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 GSTT2P0CG29 244 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 GSTT2BP0CG30 244 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 SLC35E2P0CK97 266 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 ANXA3P12429 323 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 H2AFXP16104 143 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-218ENST00000556256 PAICSP22234 425 aaKnown RBP2.1□□□□□ -2.07
SCFD1-218ENST00000556256 HTR2AP28223 471 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 CDH5P33151 784 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-218ENST00000556256 ACVR1BP36896 505 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 MDH2P40926 338 aaKnown RBP2.1□□□□□ -2.07
SCFD1-218ENST00000556256 TRPC1P48995 793 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 FNTAP49354 379 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 RIPK4P57078 832 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 RND3P61587 244 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 RPL8P62917 257 aaKnown RBP2.1□□□□□ -2.07
SCFD1-218ENST00000556256 PUDPQ08623 228 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 TRIP10Q15642 601 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 QRICH1Q2TAL8 776 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 RIPPLY2Q5TAB7 128 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 MEDAGQ5VYS4 303 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 SLX4IPQ5VYV7 408 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 ASPHD2Q6ICH7 369 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 C2orf66Q6UXQ4 117 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 CYS1Q717R9 158 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 IFNEQ86WN2 208 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 GRAMD2AQ8IUY3 354 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 STKLD1Q8NE28 680 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 CCDC110Q8TBZ0 833 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 ARNTL2Q8WYA1 636 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 TBC1D31Q96DN5 1066 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 TMEM80Q96HE8 168 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 VSIG2Q96IQ7 327 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 HPDLQ96IR7 371 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 ELMO2Q96JJ3 720 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 DEFB126Q9BYW3 111 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 PNNQ9H307 717 aaKnown RBP2.1□□□□□ -2.07
SCFD1-218ENST00000556256 WDR76Q9H967 626 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 COG4Q9H9E3 785 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 POLD4Q9HCU8 107 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 MIEF1Q9NQG6 463 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 UTP6Q9NYH9 597 aaKnown RBP2.1□□□□□ -2.07
SCFD1-218ENST00000556256 L3MBTL1Q9Y468 752 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 ATP6V0A2Q9Y487 856 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 CARMIL1Q5VZK9 1371 aa2.1□□□□□ -2.07
SCFD1-218ENST00000556256 USP6P35125 1406 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 RSPH10B2B2RC85 870 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 K7ENP7 123 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 JAK2O60674 1132 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 TRIM3O75382 744 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 IFNB1P01574 187 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 KRT8P05787 483 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 CD55P08174 381 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 RSPH10BP0C881 870 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 PDHBP11177 359 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 GDF1P27539 372 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 NAPAP54920 295 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 POLR2FP61218 127 aaKnown RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 ZNF154Q13106 437 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 GLYR1Q49A26 553 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 CELF3Q5SZQ8 465 aaKnown RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 SLC22A10Q63ZE4 541 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 AFTPHQ6ULP2 937 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 CENPUQ71F23 418 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 GET4Q7L5D6 327 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 SERPINA9Q86WD7 417 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 ZNF573Q86YE8 665 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 CENPLQ8N0S6 344 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 TEX9Q8N6V9 391 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 ZNF525Q8N782 197 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 OR13F1Q8NGS4 319 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 OR9A4Q8NGU2 314 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 CCDC26Q8TAB7 109 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 TADA1Q96BN2 335 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 DHTKD1Q96HY7 919 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 C16orf45Q96MC5 204 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-218ENST00000556256 TSGA13Q96PP4 275 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 C19orf24Q9BVV8 132 aa2.09□□□□□ -2.07
SCFD1-218ENST00000556256 ELOVL4Q9GZR5 314 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms