RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 COX4I2Q96KJ9 171 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 FCRL1Q96LA6 429 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 HS3ST6Q96QI5 342 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 PRRG4Q9BZD6 226 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 KLHL4Q9C0H6 718 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 REEP4Q9H6H4 257 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 PAQR5Q9NXK6 330 aaPredicted RBP16.89■□□□□ 0.29
CDKN3-209ENST00000556102 NTMQ9P121 344 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 PTGDR2Q9Y5Y4 395 aa16.89■□□□□ 0.29
CDKN3-209ENST00000556102 FN1P02751 2386 aaKnown RBP16.89■□□□□ 0.29
CDKN3-209ENST00000556102 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 UQCRHLA0A096LP55 91 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 NDUFB5O43674 189 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 HEXAP06865 529 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 NEFHP12036 1026 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 CPA3P15088 417 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 SDC1P18827 310 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 FRKP42685 505 aaPredicted RBP16.88■□□□□ 0.29
CDKN3-209ENST00000556102 SLC6A8P48029 635 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 PRKAG1P54619 331 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDKN3-209ENST00000556102 EXOC3L2Q2M3D2 409 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 LIPMQ5VYY2 423 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 PRSS57Q6UWY2 283 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 RNF165Q6ZSG1 346 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 C22orf34Q6ZV56 151 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 GALNT10Q86SR1 603 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 GTPBP8Q8N3Z3 284 aaPredicted RBP16.88■□□□□ 0.29
CDKN3-209ENST00000556102 OR6Y1Q8NGX8 325 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 OR4C3Q8NH37 302 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 KIF18AQ8NI77 898 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 PPCDCQ96CD2 204 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 GIMAP5Q96F15 307 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 GMPPAQ96IJ6 420 aaPredicted RBP16.88■□□□□ 0.29
CDKN3-209ENST00000556102 ADGRG7Q96K78 797 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 MS4A4EQ96PG1 132 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 RHOXF2Q9BQY4 288 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 PLSCR4Q9NRQ2 329 aa16.88■□□□□ 0.29
CDKN3-209ENST00000556102 TLN2Q9Y4G6 2542 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 C7orf72A4D263 438 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 AZIN1O14977 448 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 AKAP10O43572 662 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 SS18L1O75177 396 aaPredicted RBP16.87■□□□□ 0.29
CDKN3-209ENST00000556102 PLGP00747 810 aaPredicted RBP16.87■□□□□ 0.29
CDKN3-209ENST00000556102 ACP2P11117 423 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 PPP3CBP16298 524 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 MANFP55145 182 aaKnown RBP16.87■□□□□ 0.29
CDKN3-209ENST00000556102 CTBP2P56545 445 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 ANKRD34AQ69YU3 496 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 Q6ZSR9 355 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 SZRD1Q7Z422 152 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 TDRPQ86YL5 185 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 GSPT2Q8IYD1 628 aaKnown RBP16.87■□□□□ 0.29
CDKN3-209ENST00000556102 OR2T11Q8NH01 316 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 OR10D3Q8NH80 312 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 FBXO30Q8TB52 745 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 ZBTB8AQ96BR9 441 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 Q96MF0 132 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 TSSK3Q96PN8 268 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 C12orf65Q9H3J6 166 aaKnown RBP16.87■□□□□ 0.29
CDKN3-209ENST00000556102 ACSS1Q9NUB1 689 aaPredicted RBP16.87■□□□□ 0.29
CDKN3-209ENST00000556102 SH3BP4Q9P0V3 963 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 MID2Q9UJV3 735 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 MCTS1Q9ULC4 181 aaKnown RBP16.87■□□□□ 0.29
CDKN3-209ENST00000556102 CLEC4AQ9UMR7 237 aa16.87■□□□□ 0.29
CDKN3-209ENST00000556102 A0A1W2PRB8 838 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 COPEO14579 308 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 KCNK2O95069 426 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 SHBGP04278 402 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 IL11P20809 199 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 LCN1P31025 176 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 RAC1P63000 192 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 SLC18A2Q05940 514 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 PDE7AQ13946 482 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 CTU2Q2VPK5 515 aaKnown RBP16.86■□□□□ 0.29
CDKN3-209ENST00000556102 PLPPR5Q32ZL2 321 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 BEX5Q5H9J7 111 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 MFSD12Q6NUT3 480 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 FIGNL1Q6PIW4 674 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 YTHDF3Q7Z739 585 aaKnown RBP16.86■□□□□ 0.29
CDKN3-209ENST00000556102 ZAR1Q86SH2 424 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 MISPQ8IVT2 679 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 GATSQ8NAP1 163 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 SLC16A11Q8NCK7 471 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 OR2V1Q8NHB1 315 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 PPP1R14CQ8TAE6 165 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 ACTRT2Q8TDY3 377 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 ARSGQ96EG1 525 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 TRMOQ9BU70 441 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 PPCSQ9HAB8 311 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 FANCFQ9NPI8 374 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 GLRX2Q9NS18 164 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 MED17Q9NVC6 651 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 FIS1Q9Y3D6 152 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 PRR14LQ5THK1 2151 aa16.86■□□□□ 0.29
CDKN3-209ENST00000556102 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.85■□□□□ 0.29
CDKN3-209ENST00000556102 H7C1Q1 480 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 ADAMDEC1O15204 470 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 CXCL13O43927 109 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms