RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 KCNH1O95259 989 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 CHRNGP07510 517 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 PRPS2P11908 318 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 NEFHP12036 1026 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 FPR1P21462 350 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 FRKP42685 505 aaPredicted RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 CLK3P49761 638 aaKnown RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 PRKAG1P54619 331 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 DIO3P55073 304 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 CLDN20P56880 219 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 RPL38P63173 70 aaKnown RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 EEF1A1P68104 462 aaKnown RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 PRR5P85299 388 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 C17orf67Q0P5P2 114 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 TNK1Q13470 666 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 TMEM44Q2T9K0 475 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 GRAMD1BQ3KR37 738 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 UGT3A2Q3SY77 523 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 EEF1A1P5Q5VTE0 462 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 KANK2Q63ZY3 851 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 OR2A2Q6IF42 318 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 VWA1Q6PCB0 445 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 CHMP1BQ7LBR1 199 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 P4HA3Q7Z4N8 544 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 GALNT10Q86SR1 603 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 HIPK1Q86Z02 1210 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 MEIOBQ8N635 442 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 BANPQ8N9N5 519 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 NUP43Q8NFH3 380 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 OR4C3Q8NH37 302 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 OR2W6PQ8NHA6 318 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 CLHC1Q8NHS4 586 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 GPR151Q8TDV0 419 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 PPCDCQ96CD2 204 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 GIMAP5Q96F15 307 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 ZBED6CLQ96FA7 236 aaPredicted RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 TSSK3Q96PN8 268 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 HS3ST6Q96QI5 342 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 PIGQQ9BRB3 760 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 PINK1Q9BXM7 581 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 TBL1XR1Q9BZK7 514 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 PTGES2Q9H7Z7 377 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 C3orf14Q9HBI5 128 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 ZNF701Q9NV72 531 aaPredicted RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 MKS1Q9NXB0 559 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 NTMQ9P121 344 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 MID2Q9UJV3 735 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 EIF3LQ9Y262 564 aaKnown RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 SVEP1Q4LDE5 3571 aa9.71□□□□□ -0.85
TDP1-212ENST00000555565 TLDC2A0PJX2 215 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 SHISA8B8ZZ34 492 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 ALG1L2C9J202 215 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 H3BML4 177 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 LINC01387J3KSC0 135 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 CASKO14936 926 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 SEC14L5O43304 696 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 GMFGO60234 142 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 SMNDC1O75940 238 aaKnown RBP eCLIP9.71□□□□□ -0.86
TDP1-212ENST00000555565 ANGPTL1O95841 491 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 CHEK2O96017 543 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 FGF4P08620 206 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 ACP2P11117 423 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 BCKDHAP12694 445 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 EFNA1P20827 205 aaPredicted RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 ALDH3A1P30838 453 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 GPC1P35052 558 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 CPOXP36551 454 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 KIR2DL2P43627 348 aaPredicted RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 MANFP55145 182 aaKnown RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 EEFSECP57772 596 aaKnown RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 SIRPAP78324 504 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 FAM27E3Q08E93 113 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 GALNTL6Q49A17 601 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 GLYR1Q49A26 553 aaPredicted RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 VPS26BQ4G0F5 336 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 ARL13AQ5H913 290 aaPredicted RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 ZNF474Q6S9Z5 364 aaPredicted RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 C22orf34Q6ZV56 151 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 BTLAQ7Z6A9 289 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 TRABD2AQ86V40 505 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 CNEP1R1Q8N9A8 125 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 CDRT4Q8N9R6 151 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 SLC16A11Q8NCK7 471 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 MAPK1IP1LQ8NDC0 245 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 CEP70Q8NHQ1 597 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 ZFP28Q8NHY6 868 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 FBXO30Q8TB52 745 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 FNDC9Q8TBE3 224 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 FAM110BQ8TC76 370 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 TWIST2Q8WVJ9 160 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.71□□□□□ -0.868e-7■■■■■ 32.1
TDP1-212ENST00000555565 SLC9A6Q92581 669 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 APOPT1Q96IL0 206 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 ZNF845Q96IR2 970 aaPredicted RBP9.71□□□□□ -0.86
TDP1-212ENST00000555565 FAM111AQ96PZ2 611 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 MECRQ9BV79 373 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 ANKZF1Q9H8Y5 726 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 RNF122Q9H9V4 155 aa9.71□□□□□ -0.86
TDP1-212ENST00000555565 UBTD1Q9HAC8 227 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms