RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CENPVL1A0A0U1RR11 272 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 AHRRA9YTQ3 701 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 HMGB1P1B2RPK0 211 aaPredicted RBP12.38□□□□□ -0.43
SNX6-203ENST00000555416 SLCO1B7G3V0H7 640 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 H0YC42 278 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 DIAPH2O60879 1101 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 EPPINO95925 133 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 ACTL6AO96019 429 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 NGFRP08138 427 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 GABRA1P14867 456 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 CPN1P15169 458 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 CLNS1AP54105 237 aaKnown RBP12.38□□□□□ -0.43
SNX6-203ENST00000555416 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
SNX6-203ENST00000555416 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
SNX6-203ENST00000555416 CLDN15P56746 228 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 CLDN18P56856 261 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 PPP2R2AP63151 447 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNX6-203ENST00000555416 POMZP3Q6PJE2 187 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 EPGNQ6UW88 154 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 OR9I1Q8NGQ6 314 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 LRRC8CQ8TDW0 803 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 ADAMTS15Q8TE58 950 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 MOAP1Q96BY2 351 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 C1GALT1C1Q96EU7 318 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 SFXN2Q96NB2 322 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 UBQLN4Q9NRR5 601 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 FAF1Q9UNN5 650 aaPredicted RBP12.38□□□□□ -0.43
SNX6-203ENST00000555416 TEX15Q9BXT5 2789 aa12.38□□□□□ -0.43
SNX6-203ENST00000555416 PRAMEF27A3QJZ7 478 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 NPIPB9F8W1W9 429 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 FCMRO60667 390 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 HOXD4P09016 255 aaPredicted RBP12.37□□□□□ -0.43
SNX6-203ENST00000555416 CD1EP15812 388 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 ZNF708P17019 499 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 HK1P19367 917 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 MATN1P21941 496 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 CEACAM8P31997 349 aaPredicted RBP12.37□□□□□ -0.43
SNX6-203ENST00000555416 IDH3AP50213 366 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 FUT5Q11128 374 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 NDUFAF6Q330K2 333 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 RIPPLY2Q5TAB7 128 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 ANXA8L1Q5VT79 327 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 NSUN5P2Q63ZY6 315 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 SAXO2Q658L1 398 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 C9orf106Q8NAJ2 232 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 ACBD4Q8NC06 268 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 ASB5Q8WWX0 329 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 RAB8BQ92930 207 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 SH3YL1Q96HL8 342 aaPredicted RBP12.37□□□□□ -0.43
SNX6-203ENST00000555416 SLC35G5Q96KT7 338 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 CCDC115Q96NT0 180 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 OR52E6Q96RD3 313 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 TRIB1Q96RU8 372 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 SDF2Q99470 211 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 EBF4Q9BQW3 602 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 OR51I1Q9H343 314 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 SDHAF3Q9NRP4 125 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 KCNE5Q9UJ90 142 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 ZNF337Q9Y3M9 751 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 HCFC1P51610 2035 aa12.37□□□□□ -0.43
SNX6-203ENST00000555416 OR2M5A3KFT3 312 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 NDUFB5O43674 189 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 GSNP06396 782 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 PGRP06401 933 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 OR12D1P0DN82 309 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 UQCRC2P22695 453 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 CHMP24386 653 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 PTGER4P35408 488 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 CLK3P49761 638 aaKnown RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 ZNF136P52737 540 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 C17orf67Q0P5P2 114 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 DPY19L1Q2PZI1 675 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 PDCD4Q53EL6 469 aaKnown RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 KLHL26Q53HC5 615 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 RAET1LQ5VY80 246 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 TNFAIP8L2Q6P589 184 aaPredicted RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 ADGRE4PQ86SQ3 457 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 PM20D2Q8IYS1 436 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 ZNF295-AS1Q8N0V1 137 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 RELL2Q8NC24 303 aaPredicted RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 GOT1L1Q8NHS2 421 aaPredicted RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 MIPOL1Q8TD10 442 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 CKAP2Q8WWK9 683 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 ARSGQ96EG1 525 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 SLC35A5Q9BS91 424 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 CHST11Q9NPF2 352 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 SDR39U1Q9NRG7 319 aaPredicted RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 INTS9Q9NV88 658 aaKnown RBP12.36□□□□□ -0.43
SNX6-203ENST00000555416 BTNL2Q9UIR0 455 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 PCDHGB4Q9UN71 923 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 VDAC3Q9Y277 283 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 ABCA12Q86UK0 2595 aa12.36□□□□□ -0.43
SNX6-203ENST00000555416 DOCK7Q96N67 2140 aa12.35□□□□□ -0.43
SNX6-203ENST00000555416 INTS1Q8N201 2190 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms