RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BAG5Q9UL15 447 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 VPS4AQ9UN37 437 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 WBP11Q9Y2W2 641 aaKnown RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF451Q9Y4E5 1061 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 SNX8Q9Y5X2 465 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 NBASA2RRP1 2371 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 LOC100130705A0A1B0GUX0 176 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 SYNDIG1LA6NDD5 238 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 MYO1GB0I1T2 1018 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 NOL3O60936 208 aaKnown RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 FABP3P05413 133 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 CCDC159P0C7I6 412 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 FPR1P21462 350 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 CRHBPP24387 322 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 PCSK6P29122 969 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 DNAJA1P31689 397 aaKnown RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 PCGF2P35227 344 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 GPR143P51810 404 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 PRKAG1P54619 331 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 TMBIM6P55061 237 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 TPD52P55327 224 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 RNF4P78317 190 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 PMS2P3Q13401 168 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 RAB39AQ14964 217 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 MEP1AQ16819 746 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 MPEG1Q2M385 716 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 ZIK1Q3SY52 487 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 C6orf141Q5SZD1 244 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF691Q5VV52 312 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 HLA-DQA1Q5Y7H0 255 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 PTOV1Q86YD1 416 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 C9orf40Q8IXQ3 194 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 SAMD14Q8IZD0 417 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 C10orf111Q8N326 155 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 ZADH2Q8N4Q0 377 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 TEX19Q8NA77 164 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 OR52R1Q8NGF1 315 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 OR13F1Q8NGS4 319 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 SUN3Q8TAQ9 357 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 FBLIM1Q8WUP2 373 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF566Q969W8 418 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF354BQ96LW1 612 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 AMDHD1Q96NU7 426 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 SMAD5Q99717 465 aaKnown RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 AMBRA1Q9C0C7 1298 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 OR10A5Q9H207 317 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 SMURF2Q9HAU4 748 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 EQTNQ9NQ60 294 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 ABI3Q9P2A4 366 aa9.11□□□□□ -0.95
PSEN1-213ENST00000555386 PCDHGA9Q9Y5G4 932 aaKnown RBP9.11□□□□□ -0.95
PSEN1-213ENST00000555386 A0A1W2PRB8 838 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 HS6ST1O60243 411 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 MRPS14O60783 128 aaKnown RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ITGA10O75578 1167 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 OR2J2O76002 312 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 SEC14L2O76054 403 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 CPSF4O95639 269 aaKnown RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF682O95780 498 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 C6orf47O95873 294 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 IGKV3-11P04433 115 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ATP1B1P05026 303 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 SOAT1P35610 550 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 NR0B1P51843 470 aaKnown RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 SLC37A1P57057 533 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 SOX8P57073 446 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 MLF1P58340 268 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 CXCR4P61073 352 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 RBBP4Q09028 425 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 MGAT2Q10469 447 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 MFAP5Q13361 173 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 PDE7AQ13946 482 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 KEAP1Q14145 624 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 SPDYE7PQ495Y7 208 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 LRRC23Q53EV4 343 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF628Q5EBL2 1059 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF468Q5VIY5 522 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 IL20RBQ6UXL0 311 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 TMEM64Q6YI46 380 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 WDR53Q7Z5U6 358 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 PRR22Q8IZ63 422 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 CLECL1Q8IZS7 167 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 TMEM156Q8N614 296 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 NATD1Q8N6N6 113 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 CHDHQ8NE62 594 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 PIK3C3Q8NEB9 887 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 C7orf57Q8NEG2 295 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 OR7G2Q8NG99 324 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 OR5M3Q8NGP4 307 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ZFP90Q8TF47 636 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 TM9SF4Q92544 642 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 C12orf43Q96C57 262 aaKnown RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ZBED6CLQ96FA7 236 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 RAD21L1Q9H4I0 556 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 ADPRHL2Q9NX46 363 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 TMEFF2Q9UIK5 374 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 DTX4Q9Y2E6 619 aa9.1□□□□□ -0.95
PSEN1-213ENST00000555386 MAGED1Q9Y5V3 778 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-213ENST00000555386 C2orf92A0A1B0GVN3 265 aa9.09□□□□□ -0.95
PSEN1-213ENST00000555386 TMEM200CA6NKL6 621 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms