RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ICOSLGO75144 302 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 REM1O75628 298 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 SERPINB7O75635 380 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 AK1P00568 194 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 ATP6V1C1P21283 382 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 ITGA3P26006 1051 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 PEX2P28328 305 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 CCL11P51671 97 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 DECR1Q16698 335 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 GRAMD1BQ3KR37 738 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 IFI44LQ53G44 452 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 H3F3CQ6NXT2 135 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 ERMP1Q7Z2K6 904 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 GOLM1Q8NBJ4 401 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 NUBPLQ8TB37 319 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 DPH1Q9BZG8 443 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 MTHFD2LQ9H903 347 aaPredicted RBP9.89□□□□□ -0.83
TDP1-211ENST00000555178 CTPS2Q9NRF8 586 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 AGPAT4Q9NRZ5 378 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 PLA2G3Q9NZ20 509 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 NTNG1Q9Y2I2 539 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 CSAG2Q9Y5P2 127 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 KCNMB2Q9Y691 235 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 NPIPB9F8W1W9 429 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 OIP5O43482 229 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ABCB7O75027 752 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 IL33O95760 270 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 IFNA14P01570 189 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 CYP4B1P13584 511 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 IL7RP16871 459 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 MAGEA2P43356 314 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 MLF1P58340 268 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 EEF1A1P68104 462 aaKnown RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 SLC34A1Q06495 639 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 LAPTM4AQ15012 233 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 NPTX1Q15818 432 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 SNCBQ16143 134 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.88□□□□□ -0.83
TDP1-211ENST00000555178 MRPL2Q5T653 305 aaKnown RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 LINC00696Q6ZRV3 163 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 RPS19BP1Q86WX3 136 aaKnown RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 CARM1Q86X55 608 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 KBTBD2Q8IY47 623 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 PEX5LQ8IYB4 626 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 BEST3Q8N1M1 668 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 OR6T1Q8NGN1 323 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 DIO2Q92813 273 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ZNF524Q96C55 264 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ZNF354BQ96LW1 612 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 NODALQ96S42 347 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 MAGIXQ9H6Y5 334 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 NTN4Q9HB63 628 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 IL1RAPQ9NPH3 570 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 NDUFAF4Q9P032 175 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 RHCGQ9UBD6 479 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 MAGED1Q9Y5V3 778 aaPredicted RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 NPFFR2Q9Y5X5 522 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 U3KQV3 271 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 MPDZO75970 2070 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ZNF891A8MT65 544 aaPredicted RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 TO15178 435 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 TPST2O60704 377 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ADAM11O75078 769 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 UTS2O95399 124 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 FABP3P05413 133 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 GKN3PP0CG01 181 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 PRG2P13727 222 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 IL12BP29460 328 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 DCAF7P61962 342 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 GANABQ14697 944 aaKnown RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 INPP5JQ15735 1006 aaPredicted RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 CD226Q15762 336 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 IL20RBQ6UXL0 311 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 DEF8Q6ZN54 512 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 CCDC81Q6ZN84 652 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 MDGA2Q7Z553 956 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 EPHX4Q8IUS5 362 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 HS3ST5Q8IZT8 346 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 SLC34A3Q8N130 599 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 GALNT16Q8N428 558 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ICA1LQ8NDH6 482 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 FDCSPQ8NFU4 85 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 OR8K3Q8NH51 312 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 GEMIN6Q8WXD5 167 aaKnown RBP9.88□□□□□ -0.83
TDP1-211ENST00000555178 LZICQ8WZA0 190 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 PROX1Q92786 737 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 NACC2Q96BF6 587 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 G6PC3Q9BUM1 346 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 PINK1Q9BXM7 581 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
TDP1-211ENST00000555178 ATRXP46100 2492 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 SAC3D1A6NKF1 404 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 PCDH17O14917 1159 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 HNRNPRO43390 633 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 WISP1O95388 367 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 NTN1O95631 604 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 OXSR1O95747 527 aaPredicted RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 LGI1O95970 557 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 CST1P01037 141 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms