RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CELF3Q5SZQ8 465 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 LEG1Q6P5S2 330 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TMEM220Q6QAJ8 160 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TMEM184AQ6ZMB5 413 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 CCDC80Q76M96 950 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 CENPQQ7L2Z9 268 aaPredicted RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 FCRLAQ7L513 359 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 DHDDSQ86SQ9 333 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 RANBP3LQ86VV4 465 aaPredicted RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 ZNF383Q8NA42 475 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 STXBP6Q8NFX7 210 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 OR1F12Q8NHA8 337 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TM4SF19Q96DZ7 209 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 POM121L2Q96KW2 1035 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TECTBQ96PL2 329 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 CCT8L2Q96SF2 557 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 LPAR4Q99677 370 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 GAL3ST1Q99999 423 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 CENPKQ9BS16 269 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TTYH2Q9BSA4 534 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 DNTTIP1Q9H147 329 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 LRRN3Q9H3W5 708 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TDRD3Q9H7E2 651 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 SUDS3Q9H7L9 328 aaPredicted RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 POLD4Q9HCU8 107 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 KLHL28Q9NXS3 571 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 CACNG5Q9UF02 275 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 MRPS28Q9Y2Q9 187 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 WIPI2Q9Y4P8 454 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 CSDC2Q9Y534 153 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 INSRP06213 1382 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TRAV25A0A0B4J276 109 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 FBLL1A6NHQ2 334 aaKnown RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 CASKO14936 926 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 EPHB6O15197 1021 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 DFFBO76075 338 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TOXO94900 526 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 FGF19O95750 216 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 CLPTM1O96005 669 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 FAM157CP0CG43 387 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 SRMP19623 302 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 HPCAL1P37235 193 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 BRCC3P46736 316 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 CSNK1EP49674 416 aaKnown RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 RGS8P57771 180 aaPredicted RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 RPL27P61353 136 aaKnown RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 BNIP1Q12981 228 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 MESDQ14696 234 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TAF13Q15543 124 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 SFT2D3Q587I9 215 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 C1orf189Q5VU69 101 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 AGAP7PQ5VUJ5 663 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 METTL11BQ5VVY1 283 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 PNCKQ6P2M8 343 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 BHLHB9Q6PI77 547 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TMEM207Q6UWW9 146 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TMEM107Q6UX40 140 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 LANCL3Q6ZV70 420 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 SH2D5Q6ZV89 423 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 Q6ZVQ6 151 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 GPR142Q7Z601 462 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TGIF2LXQ8IUE1 241 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TBC1D10CQ8IV04 446 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 ZNF440Q8IYI8 595 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 CLDN19Q8N6F1 224 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 CSGALNACT2Q8N6G5 542 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 LHX4Q969G2 390 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 PNPLA2Q96AD5 504 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 EFHD2Q96C19 240 aaPredicted RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 C10orf35Q96D05 121 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 ELMO2Q96JJ3 720 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 C7orf34Q96L11 122 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 CAPNS2Q96L46 248 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 ATP6V1G3Q96LB4 118 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 LURAP1Q96LR2 239 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 AGAP4Q96P64 663 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 SLC38A2Q96QD8 506 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 COPS8Q99627 209 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 PSD2Q9BQI7 771 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TRIM51Q9BSJ1 452 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 APOOQ9BUR5 198 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 PARD6BQ9BYG5 372 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 FAM49AQ9H0Q0 323 aaPredicted RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 SLC25A51Q9H1U9 297 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 FNDC4Q9H6D8 234 aaPredicted RBP4.44□□□□□ -1.7
VRK1-203ENST00000555067 SLC7A10Q9NS82 523 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 ECHDC1Q9NTX5 307 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 KLRF1Q9NZS2 232 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 PAK5Q9P286 719 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 MBD2Q9UBB5 411 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 TBC1D24Q9ULP9 559 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 SLC9A8Q9Y2E8 581 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 POLDIP2Q9Y2S7 368 aa4.44□□□□□ -1.7
VRK1-203ENST00000555067 PPIAL4EA0A075B759 164 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 LOC100653049A0A140TA62 436 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 ZNF879B4DU55 563 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 C9JVG2 144 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TEX46H3BTG2 121 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms