RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PHYHO14832 338 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CA12O43570 354 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 KDELR3O43731 214 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PROS1P07225 676 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SOX9P48436 509 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 HHEXQ03014 270 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 DEFB133Q30KQ1 61 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TIGD3Q6B0B8 471 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TSPAN33Q86UF1 283 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 FITM2Q8N6M3 262 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 OR52B2Q96RD2 323 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SERINC2Q96SA4 455 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SYT3Q9BQG1 590 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 LGALS13Q9UHV8 139 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 FRMPD1Q5SYB0 1578 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 AQP12BA6NM10 295 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 C17orf105B2RV13 164 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CHRNB1P11230 501 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 UGT2B7P16662 529 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 MC3RP41968 323 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 F2RL1P55085 397 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 MRPS34P82930 218 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 IKZF1Q13422 519 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TLDC1Q6P9B6 456 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 NAA40Q86UY6 237 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TCEAL8Q8IYN2 117 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SCAMP4Q969E2 229 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 FUCA2Q9BTY2 467 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 NMNAT2Q9BZQ4 307 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 GPN2Q9H9Y4 310 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 STUB1Q9UNE7 303 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ROBO1Q9Y6N7 1651 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 HLA-FP30511 346 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SLC35A2P78381 396 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 GLO1Q04760 184 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SPOCK1Q08629 439 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PDE7AQ13946 482 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 DOC2AQ14183 400 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 RAB41Q5JT25 222 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PDZD9Q8IXQ8 264 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SLC5A8Q8N695 610 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PAQR8Q8TEZ7 354 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 NANOGQ9H9S0 305 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 BARX1Q9HBU1 254 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 MYOTQ9UBF9 498 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 POLEQ07864 2286 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 IQGAP1P46940 1657 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ABCA9Q8IUA7 1624 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 RNF212BA8MTL3 300 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 BCKDHBP21953 392 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 HNRNPFP52597 415 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ACTBP60709 375 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 RAC1P63000 192 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ACTG1P63261 375 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 GRM7Q14831 915 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 RAB35Q15286 201 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TAF9Q16594 264 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SERPINA12Q8IW75 414 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 STEAP2Q8NFT2 490 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CMTM2Q8TAZ6 248 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 NUDT22Q9BRQ3 303 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PINK1Q9BXM7 581 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 DERL2Q9GZP9 239 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 LIN28AQ9H9Z2 209 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PCDHGA1Q9Y5H4 931 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ARHGAP23Q9P227 1491 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PRSS51A0A1B0GVH4 220 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 A0A1W2PRV1 198 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TCRBV7S3A2A0A539 114 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 CBR1P16152 277 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 RABIFP47224 123 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 DAP3P51398 398 aaKnown RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 LBX1P52954 281 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MVKQ03426 396 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 LMAN2Q12907 356 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 LYSMD4Q5XG99 296 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MFSD5Q6N075 450 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SLC46A3Q7Z3Q1 461 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SFXN5Q8TD22 340 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 HLA-CQ95604 372 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ISOC1Q96CN7 298 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SMOC2Q9H3U7 446 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MRPL22Q9NWU5 206 aaKnown RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 PTGDR2Q9Y5Y4 395 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 G3V3Y1 287 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 KIAA0513O60268 411 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TAS2R38P59533 333 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 C14orf28Q4W4Y0 310 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SHEQ5VZ18 495 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 FAM185AQ8N0U4 392 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 FOXJ1Q92949 421 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SAMD8Q96LT4 415 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 HCRTO43612 131 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 NFYBP25208 207 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 IL3RAP26951 378 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TGM4P49221 684 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 NADK2Q4G0N4 442 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ZMYND19Q96E35 227 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms