RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ERP29P30040 261 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CSF2RBP32927 897 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 IGFALSP35858 605 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CSNK1EP49674 416 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RAB28P51157 221 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NUDT6P53370 316 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ERVFC1P60507 584 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 DCDP81605 110 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PIGFQ07326 219 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CNTN1Q12860 1018 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HEPACAMQ14CZ8 416 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TRAM2Q15035 370 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SRSF7Q16629 238 aaKnown RBP eCLIP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PNLIPRP3Q17RR3 467 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF528Q3MIS6 628 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NDUFAF5Q5TEU4 345 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 FBXO42Q6P3S6 717 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM65Q6PI78 240 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TMIGD1Q6UXZ0 262 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 MEPCEQ7L2J0 689 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 BIVMQ86UB2 503 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 KRT78Q8N1N4 520 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 AMER3Q8N944 861 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 Q8NFD4 153 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 MCFD2Q8NI22 146 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PROX1Q92786 737 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 OR2M2Q96R28 347 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TSSK6Q9BXA6 273 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PPIL3Q9H2H8 161 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RNF121Q9H920 327 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF556Q9HAH1 456 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM100Q9NV29 134 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 EPHA6Q9UF33 1036 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CRLS1Q9UJA2 301 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TCFL5Q9UL49 500 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SNX5Q9Y5X3 404 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 FKBP7Q9Y680 259 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SYNJ2BP-COX16A0A087WUM0 186 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 A0A1B0GUH1 482 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MEIOCA2RUB1 952 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 POM121BA6NF01 834 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NAP1L6A6NFF2 107 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF726A6NNF4 738 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 C9JVG2 144 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PTGES3LE9PB15 166 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 KHNYNO15037 678 aaKnown RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GPRIN2O60269 458 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MOCS2O96007 188 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ADH1AP07327 375 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 RHOP08100 348 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF735P0CB33 412 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NAGAP17050 411 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PMELP40967 661 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GPR3P46089 330 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 P2RY4P51582 365 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CAMK2DQ13557 499 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 RNPS1Q15287 305 aaKnown RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NEDD8Q15843 81 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 UAP1L1Q3KQV9 507 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM196Q5HYL7 178 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 C1orf100Q5SVJ3 147 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 LAYNQ6UX15 382 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CCBE1Q6UXH8 406 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NOXA1Q86UR1 476 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CA13Q8N1Q1 262 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF619Q8N2I2 560 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 LILRA3Q8N6C8 439 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TMCO5AQ8N6Q1 288 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SIRT6Q8N6T7 355 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 AQP11Q8NBQ7 271 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 KREMEN2Q8NCW0 462 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF540Q8NDQ6 660 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 VPS37AQ8NEZ2 397 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 OR6T1Q8NGN1 323 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CD99L2Q8TCZ2 262 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SMIM4Q8WVI0 70 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 RAD51AP1Q96B01 352 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PPCDCQ96CD2 204 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SLC25A38Q96DW6 304 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PPP1R36Q96LQ0 422 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SLC22A4Q9H015 551 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 C11orf54Q9H0W9 315 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ADNPQ9H2P0 1102 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PIF1Q9H611 641 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MTHFD2LQ9H903 347 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MEPEQ9NQ76 525 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 AHSPQ9NZD4 102 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 COX16Q9P0S2 106 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CLEC2DQ9UHP7 191 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NDRG2Q9UN36 371 aaKnown RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CAMK2AQ9UQM7 478 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 KCNK7Q9Y2U2 307 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PIAS3Q9Y6X2 628 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 A0A1B0GWJ7 208 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 POM121CA8CG34 1229 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 EFCAB7A8K855 629 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TGFBR3LH3BV60 316 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 M0R3G1 203 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SS18L1O75177 396 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms