RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 GALNSP34059 522 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 PTGS2P35354 604 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 DCTP40126 519 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 XKP51811 444 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 SMSP52788 366 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 PPIAP62937 165 aaKnown RBP11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF385BQ569K4 471 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 HLA-DQA1Q5Y7H0 255 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF787Q6DD87 383 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ENPP6Q6UWR7 440 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 Q6ZPB1 254 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-214ENST00000554604 MRGPRGQ86SM5 289 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 SLC22A16Q86VW1 577 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 CARM1Q86X55 608 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 GALNT12Q8IXK2 581 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF808Q8N4W9 903 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-214ENST00000554604 SLC15A4Q8N697 577 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 OR2M7Q8NG81 312 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 OR4A15Q8NGL6 344 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 FBXO30Q8TB52 745 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ITLN2Q8WWU7 325 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-214ENST00000554604 CNBD2Q96M20 576 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 FAM173AQ9BQD7 235 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ANKRD60Q9BZ19 345 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF696Q9H7X3 374 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 CXorf21Q9HAI6 301 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 DEPPQ9NTK1 212 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 DNAJB9Q9UBS3 223 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 PSME2Q9UL46 239 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 OAZ3Q9UMX2 235 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 PCDHGB4Q9UN71 923 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 NCKAP5O14513 1909 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 RNF103-CHMP3A0A140T963 221 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 A0A1B0GTH9 108 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 FAM166BA8MTA8 275 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 UPK1AO00322 258 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 DLGAP1O14490 977 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF354AO60765 605 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-214ENST00000554604 ERAL1O75616 437 aaKnown RBP11.42□□□□□ -0.58
SHMT2-214ENST00000554604 PDE9AO76083 593 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 PRKD3O94806 890 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 HPRP00739 348 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 SERPINA1P01009 418 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 TPOP07202 933 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 CPMP14384 443 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 PORP16435 677 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-214ENST00000554604 CNR1P21554 472 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 NT5EP21589 574 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 ALDH9A1P49189 494 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 SLC37A1P57057 533 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 TRA2BP62995 288 aaKnown RBP11.42□□□□□ -0.58
SHMT2-214ENST00000554604 SLC22A10Q63ZE4 541 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 ARHGAP11AQ6P4F7 1023 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 XKRXQ6PP77 449 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 PTOV1Q86YD1 416 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 TAGAPQ8N103 731 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 TRIML2Q8N7C3 387 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 FAM86B1Q8N7N1 296 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 TFAP2CQ92754 450 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 SPACA9Q96E40 222 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-214ENST00000554604 PYURFQ96I23 114 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 FAIM2Q9BWQ8 316 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 WWTR1Q9GZV5 400 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 DEFB127Q9H1M4 99 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 RAD21L1Q9H4I0 556 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 NTN4Q9HB63 628 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 RPS6KA6Q9UK32 745 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 V9GYQ6 96 aa11.42□□□□□ -0.58
SHMT2-214ENST00000554604 INTS1Q8N201 2190 aaKnown RBP11.41□□□□□ -0.58
SHMT2-214ENST00000554604 A0A0G2JMM0 328 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 C2orf92A0A1B0GVN3 265 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 A0A1W2PPB8 328 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 A0A1W2PRS3 328 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 A0A1W2PS29 197 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 PINLYPA6NC86 204 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 KIR3DP1A8MWS1 328 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 PDLIM1O00151 329 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 IL3P08700 152 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 CCL3P10147 92 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF23P17027 643 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 DDCP20711 480 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 SSTR4P31391 388 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 KDELR2P33947 212 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 PCGF2P35227 344 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 MAGEA2P43356 314 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 DNASE1L1P49184 302 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 MYBPC1Q00872 1141 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 FADDQ13158 208 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 GAB1Q13480 694 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 EBPQ15125 230 aaKnown RBP11.41□□□□□ -0.58
SHMT2-214ENST00000554604 RGNQ15493 299 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 SLC48A1Q6P1K1 146 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 C3P1Q6ZMU1 363 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 DOLPP1Q86YN1 238 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 DND1Q8IYX4 353 aaKnown RBP11.41□□□□□ -0.58
SHMT2-214ENST00000554604 SLC34A3Q8N130 599 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 SVOPLQ8N434 492 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 OR52N2Q8NGI0 321 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms