RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CCM2LQ9NUG4 571 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MUTYHQ9UIF7 546 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ADCY10Q96PN6 1610 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 IRGMA1A4Y4 181 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 F5H0A9 414 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ACKR2O00590 384 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SLC22A3O75751 556 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SLC6A12P48065 614 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 HLCSP50747 726 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 LYSMD4Q5XG99 296 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 KLHDC10Q6PID8 442 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FBXL6Q8N531 539 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PRELID2Q8N945 189 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR10G2Q8NGC3 310 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR11L1Q8NGX0 322 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 REEP6Q96HR9 211 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF75AQ96N20 296 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TRIB1Q96RU8 372 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF559Q9BR84 538 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TP63Q9H3D4 680 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RNF11Q9Y3C5 154 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SEC14L6B5MCN3 397 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF728P0DKX0 622 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 APLNRP35414 380 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MALLQ13021 153 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM201Q5SNT2 666 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 HACD4Q5VWC8 232 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MFSD12Q6NUT3 480 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ARPINQ7Z6K5 226 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SLC22A16Q86VW1 577 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TRAM1L1Q8N609 369 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C22orf15Q8WYQ4 148 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 NRTNQ99748 197 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SEMA6CQ9H3T2 930 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SMOC2Q9H3U7 446 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 WASH6PQ9NQA3 447 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ITGA11Q9UKX5 1188 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CICQ96RK0 1608 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TMSB15BA0A087X1C1 80 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TGM6O95932 706 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MAKP20794 623 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 DNASE1P24855 282 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 EXOSC6Q5RKV6 272 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 STAG3L4Q8TBR4 150 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GEMIN6Q8WXD5 167 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 FAM3CQ92520 227 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TXNDC15Q96J42 360 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF597Q96LX8 424 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HAPLN3Q96S86 360 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 BTBD2Q9BX70 525 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PATZ1Q9HBE1 687 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SLCO1B3Q9NPD5 702 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TAS2R3Q9NYW6 316 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TCAF2A6NFQ2 919 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HAS3O00219 553 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TYRP14679 529 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IGFBP5P24593 272 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 AQP4P55087 323 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 WDR4P57081 412 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PAQR3Q6TCH7 311 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CXorf67Q86X51 503 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SLITRK4Q8IW52 837 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CHST6Q9GZX3 395 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GAREM1Q9H706 876 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF334Q9HCZ1 680 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TRAPPC4Q9Y296 219 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SCN11AQ9UI33 1791 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 A0A096LPE4 126 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 A0A1W2PPZ6 126 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MROH6A6NGR9 719 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 H3BMQ9 156 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ABCB7O75027 752 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 NTRK3Q16288 839 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LY6EQ16553 131 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RTP2Q5QGT7 225 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 FAM57BQ71RH2 274 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SLC37A3Q8NCC5 494 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF431Q8TF32 576 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 WDR6Q9NNW5 1121 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PCDHGB1Q9Y5G3 927 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 YKT6O15498 198 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ANGPTL7O43827 346 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CACNG1Q06432 222 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 BCL2L15Q5TBC7 163 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 REP15Q6BDI9 236 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 Q6ZSR6 202 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GCNT2Q8N0V5 402 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RHBDF1Q96CC6 855 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SHDQ96IW2 340 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 POLR2J2Q9GZM3 115 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 DISC1C4P0D8 188 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 BCAT2O15382 392 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IFNW1P05000 195 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IDH3GP51553 393 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SLC35A2P78381 396 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PODNL1Q6PEZ8 512 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 B3GLCTQ6Y288 498 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PPP1R35Q8TAP8 253 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ST8SIA4Q92187 359 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms