RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LRRC34Q8IZ02 419 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 MEIOBQ8N635 442 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 COX18Q8N8Q8 333 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 SLC16A11Q8NCK7 471 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 OR7A2PQ8NGA2 310 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 PIWIL2Q8TC59 973 aaKnown RBP7.9□□□□□ -1.14
ACTN1-213ENST00000554508 MOAP1Q96BY2 351 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 FAM120BQ96EK7 910 aaKnown RBP7.9□□□□□ -1.14
ACTN1-213ENST00000554508 RMND5BQ96G75 393 aaPredicted RBP7.9□□□□□ -1.14
ACTN1-213ENST00000554508 STACQ99469 402 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 PIGQQ9BRB3 760 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 G6PC3Q9BUM1 346 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 C1orf50Q9BV19 199 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 BTBD2Q9BX70 525 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 NUF2Q9BZD4 464 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 BHLHE41Q9C0J9 482 aaPredicted RBP7.9□□□□□ -1.14
ACTN1-213ENST00000554508 PIGUQ9H490 435 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 SLCO1B3Q9NPD5 702 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 DUSP22Q9NRW4 184 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 ZCCHC3Q9NUD5 404 aaKnown RBP7.9□□□□□ -1.14
ACTN1-213ENST00000554508 ASIC5Q9NY37 505 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 NOP53Q9NZM5 478 aaKnown RBP7.9□□□□□ -1.14
ACTN1-213ENST00000554508 FLRT3Q9NZU0 649 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 JKAMPQ9P055 326 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 HAO1Q9UJM8 370 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 RPH3AQ9Y2J0 694 aaPredicted RBP7.9□□□□□ -1.14
ACTN1-213ENST00000554508 L3MBTL1Q9Y468 752 aa7.9□□□□□ -1.14
ACTN1-213ENST00000554508 FBN2P35556 2912 aa7.9□□□□□ -1.15
ACTN1-213ENST00000554508 ABCA4P78363 2273 aa7.9□□□□□ -1.15
ACTN1-213ENST00000554508 AKAP9Q99996 3911 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 CCDC168Q8NDH2 2452 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 A0A087WZY1 265 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 A0A1W2PQD3 144 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 TRPC5OSA6NMA1 111 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 B4DXG7 233 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 SLCO1B7G3V0H7 640 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 HDAC3O15379 428 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 HCRTR2O43614 444 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 NDUFB5O43674 189 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 OXSR1O95747 527 aaPredicted RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 HMGN2P05204 90 aaKnown RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 CRHP06850 196 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 G6PDP11413 515 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 HPGDP15428 266 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 POU3F2P20265 443 aaPredicted RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 MDH1P40925 334 aaKnown RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 KRTAP10-9P60411 292 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 RPS3AP61247 264 aaKnown RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 POU6F2P78424 691 aaPredicted RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 STX5Q13190 355 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 DUSP5Q16690 384 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 RAET1LQ5VY80 246 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 OR2A2Q6IF42 318 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 CDC73Q6P1J9 531 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 BHLHB9Q6PI77 547 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 APOOLQ6UXV4 268 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 CAMKMTQ7Z624 323 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 MISPQ8IVT2 679 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 WDR75Q8IWA0 830 aaKnown RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 KRTCAP2Q8N6L1 136 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 C9orf106Q8NAJ2 232 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 OR56A1Q8NGH5 318 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 SFXN5Q8TD22 340 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 ADAMTS15Q8TE58 950 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 C1GALT1C1Q96EU7 318 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 C16orf58Q96GQ5 468 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 C7orf26Q96N11 449 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 DUSP26Q9BV47 211 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 SFXN3Q9BWM7 321 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 ACTRT3Q9BYD9 372 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 RTN4RQ9BZR6 473 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 HOXD1Q9GZZ0 328 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 PIGMQ9H3S5 423 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 AKTIPQ9H8T0 292 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 NEUROD4Q9HD90 331 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 UBQLN4Q9NRR5 601 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 SIRT3Q9NTG7 399 aaPredicted RBP7.89□□□□□ -1.15
ACTN1-213ENST00000554508 CLCF1Q9UBD9 225 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 ZNF337Q9Y3M9 751 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 SNX8Q9Y5X2 465 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 CSMD2Q7Z408 3487 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 POLQO75417 2590 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 AKAP6Q13023 2319 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 TACC2O95359 2948 aa7.89□□□□□ -1.15
ACTN1-213ENST00000554508 GOLGA8QA0A0J9YX86 632 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 OR2M5A3KFT3 312 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 GOLGA8OA6NCC3 632 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 C17orf51A8MQB3 221 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 GOLGA8NF8WBI6 632 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 SCDO00767 359 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 CFLARO15519 480 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 TNFRSF21O75509 655 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 C6orf47O95873 294 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 VIMP08670 466 aaKnown RBP7.88□□□□□ -1.15
ACTN1-213ENST00000554508 EFNA1P20827 205 aaPredicted RBP7.88□□□□□ -1.15
ACTN1-213ENST00000554508 ATP6V1C1P21283 382 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 TCEA1P23193 301 aaKnown RBP7.88□□□□□ -1.15
ACTN1-213ENST00000554508 SORDQ00796 357 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 TP53BP2Q13625 1128 aa7.88□□□□□ -1.15
ACTN1-213ENST00000554508 LASP1Q14847 261 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms