RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CDR2LQ86X02 465 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-211ENST00000554437 MARCH9Q86YJ5 346 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 WDR49Q8IV35 697 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 GVQW1Q8N7I0 195 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 SAMD12Q8N8I0 201 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 ICA1LQ8NDH6 482 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 EMG1Q92979 244 aaKnown RBP3.94□□□□□ -1.78
SCFD1-211ENST00000554437 GLYATL1Q969I3 302 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 RAB39BQ96DA2 213 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 LRRC39Q96DD0 335 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 ATP6V1G3Q96LB4 118 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 NPAS2Q99743 824 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 C11orf70Q9BRQ4 267 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 TMEM43Q9BTV4 400 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 MAGT1Q9H0U3 335 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 PARD3Q8TEW0 1356 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 A0A087WWV3 80 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 A0A1B0GTQ1 180 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 WASH3PC4AMC7 463 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 PPIAL4DF5H284 164 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 CETN3O15182 167 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 BCAS1O75363 584 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 CAPN1P07384 714 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 PABPC4LP0CB38 370 aaKnown RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 PNMTP11086 282 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 LONP1P36776 959 aaKnown RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 PPT1P50897 306 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 GEMP55040 296 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 CSTF1Q05048 431 aaKnown RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 BST1Q10588 318 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 LRIT3Q3SXY7 679 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 SPANXN2Q5MJ10 180 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 DCAF12Q5T6F0 453 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 PRAMEF5Q5TYX0 476 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 PRAMEF6Q5VXH4 476 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 LIPKQ5VXJ0 399 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 TTC19Q6DKK2 380 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 ARMCX5Q6P1M9 558 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 C16orf62Q7Z3J2 963 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 CCDC71Q8IV32 467 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 LRRC75A-AS1Q8N1F1 130 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 ARFGAP2Q8N6H7 521 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 LINC00612Q8N6U2 182 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 BPIFCQ8NFQ6 507 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 SUN5Q8TC36 379 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 ITLN1Q8WWA0 313 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 ISG20Q96AZ6 181 aaKnown RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 NPY6RQ99463 290 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 SLC39A3Q9BRY0 314 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 IQCGQ9H095 443 aaKnown RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 GANQ9H2C0 597 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 GDF3Q9NR23 364 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 DDX28Q9NUL7 540 aaKnown RBP3.93□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF581Q9P0T4 197 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 SEC14L3Q9UDX4 400 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 B9D1Q9UPM9 204 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 HCFC1P51610 2035 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 KIF7Q2M1P5 1343 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 PHLPP2Q6ZVD8 1323 aa3.93□□□□□ -1.78
SCFD1-211ENST00000554437 CUX2O14529 1486 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 HEATR9A2RTY3 570 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 TCP11X1B4DZS4 312 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 SDHDO14521 159 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 ALOX15BO15296 676 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 LCMT2O60294 686 aaKnown RBP3.92□□□□□ -1.78
SCFD1-211ENST00000554437 FCMRO60667 390 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 TM7SF2O76062 418 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 KRT14P02533 472 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 APRTP07741 180 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 FOSL2P15408 326 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 MX1P20591 662 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 FCARP24071 287 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 NF2P35240 595 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 TRIM23P36406 574 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 ELK3P41970 407 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 MATKP42679 507 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 ALDH3B1P43353 468 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 GSTO1P78417 241 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 FGL1Q08830 312 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 CCL14Q16627 93 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 NHLRC3Q5JS37 347 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 C1orf189Q5VU69 101 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 REP15Q6BDI9 236 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 ZSCAN25Q6NSZ9 544 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 SLC39A4Q6P5W5 647 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 KDM7AQ6ZMT4 941 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 Q6ZR54 194 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 Q6ZRG5 221 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 BZW1Q7L1Q6 419 aaKnown RBP3.92□□□□□ -1.78
SCFD1-211ENST00000554437 TRPM8Q7Z2W7 1104 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 ECHDC2Q86YB7 292 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 HIPK1Q86Z02 1210 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 CBWD2Q8IUF1 395 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF683Q8IZ20 524 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 COMMD1Q8N668 190 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 ANKFN1Q8N957 763 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 COLGALT1Q8NBJ5 622 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 BBS1Q8NFJ9 593 aa3.92□□□□□ -1.78
SCFD1-211ENST00000554437 OR1K1Q8NGR3 316 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms