RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RPH3AQ9Y2J0 694 aaPredicted RBP8.05□□□□□ -1.12
TDP1-208ENST00000553989 AP4S1Q9Y587 144 aa8.05□□□□□ -1.12
TDP1-208ENST00000553989 PRSS51A0A1B0GVH4 220 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 SH3D21A4FU49 640 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 LRRC14BA6NHZ5 514 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 PGRMC2O15173 223 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 NDUFB5O43674 189 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 UGDHO60701 494 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 DNAJA2O60884 412 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 ERAL1O75616 437 aaKnown RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 PPM1BO75688 479 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 GOSR1O95249 250 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 CLDN9O95484 217 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 IL18BPO95998 194 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 ACTL6AO96019 429 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 KLK1P06870 262 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 INHBBP09529 407 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 CPMP14384 443 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 VAMP1P23763 118 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 ABCD3P28288 659 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 PTPN6P29350 595 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 GSTT1P30711 240 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 SLC7A1P30825 629 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 XKP51811 444 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 DIO3P55073 304 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 NKX6-1P78426 367 aaPredicted RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 FUT7Q11130 342 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 CEACAM7Q14002 265 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 TECRLQ5HYJ1 363 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 NHSL2Q5HYW2 709 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 CCNYL2Q5T2Q4 361 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 FNDC7Q5VTL7 733 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 TIGD3Q6B0B8 471 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 MRM1Q6IN84 353 aaKnown RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 POMZP3Q6PJE2 187 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 ENPP6Q6UWR7 440 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 CLEC9AQ6UXN8 241 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 PAGE2Q7Z2X7 111 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 SPATA19Q7Z5L4 167 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 SPATA24Q86W54 205 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 P3H2Q8IVL5 708 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 GCNT2Q8N0V5 402 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 PACRGLQ8N7B6 248 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 HIPK4Q8NE63 616 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 OR7G1Q8NGA0 311 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 ADIPOR1Q96A54 375 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 INTS12Q96CB8 462 aaKnown RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 CCDC124Q96CT7 223 aaKnown RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 OMA1Q96E52 524 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 TM9SF2Q99805 663 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 SFXN3Q9BWM7 321 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 ZNF717Q9BY31 904 aaPredicted RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 ITPAQ9BY32 194 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 SHCBP1LQ9BZQ2 653 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 NXF5Q9H1B4 397 aaKnown RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 MUC13Q9H3R2 512 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 PLEKHF2Q9H8W4 249 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 GALNT9Q9HCQ5 603 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 SERHLQ9NQF3 203 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 GALNT8Q9NY28 637 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 AHSPQ9NZD4 102 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 ADA2Q9NZK5 511 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 EHD3Q9NZN3 535 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 CFL2Q9Y281 166 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 RNF11Q9Y3C5 154 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 TSC22D4Q9Y3Q8 395 aa8.04□□□□□ -1.12
TDP1-208ENST00000553989 TNPO3Q9Y5L0 923 aaKnown RBP8.04□□□□□ -1.12
TDP1-208ENST00000553989 ACANP16112 2415 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 PRAMEF25A6NGN4 478 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 AQP12BA6NM10 295 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 FOXE1O00358 373 aaPredicted RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 ARHGEF9O43307 516 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 GUCY1B2O75343 617 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 SEMA3DO95025 777 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 SIX3O95343 332 aaPredicted RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 CLPTM1O96005 669 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 NPPAP01160 153 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 HRGP04196 525 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 C8BP07358 591 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ABCB1P08183 1280 aaPredicted RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 MTHFD2P13995 350 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 PORP16435 677 aaPredicted RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 PCSK2P16519 638 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 GPX3P22352 226 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 TCEA1P23193 301 aaKnown RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 ALDH9A1P49189 494 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 MRPL19P49406 292 aaKnown RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 MAPK12P53778 367 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 NR1H2P55055 460 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 AQP4P55087 323 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 PSMA6P60900 246 aaKnown RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 MS4A2Q01362 244 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 FOXF2Q12947 444 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 LSAMPQ13449 338 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 EXOSC7Q15024 291 aaKnown RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 CNPY1Q3B7I2 92 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 C11orf91Q3C1V1 193 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 AGKQ53H12 422 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 SGO1Q5FBB7 561 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 AP1ARQ63HQ0 302 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms