RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ZNF385DQ9H6B1 395 aa16.77■□□□□ 0.28
CPSF2-202ENST00000553427 PTGES2Q9H7Z7 377 aa16.77■□□□□ 0.28
CPSF2-202ENST00000553427 DCTN4Q9UJW0 460 aa16.77■□□□□ 0.28
CPSF2-202ENST00000553427 DKKL1Q9UK85 242 aa16.77■□□□□ 0.28
CPSF2-202ENST00000553427 UTP20O75691 2785 aaKnown RBP16.77■□□□□ 0.27
CPSF2-202ENST00000553427 ICE1Q9Y2F5 2266 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 NCOA6Q14686 2063 aaPredicted RBP16.76■□□□□ 0.27
CPSF2-202ENST00000553427 C17orf51A8MQB3 221 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 NDUFB5O43674 189 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 ZIC3O60481 467 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 KRT75O95678 551 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 TROVE2P10155 538 aaKnown RBP eCLIP16.76■□□□□ 0.27
CPSF2-202ENST00000553427 HPGDP15428 266 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 BMP7P18075 431 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 MSX1P28360 303 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 DCTP40126 519 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 ATP12AP54707 1039 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 STX5Q13190 355 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 GLYR1Q49A26 553 aaPredicted RBP16.76■□□□□ 0.27
CPSF2-202ENST00000553427 FLYWCH1Q4VC44 716 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 KLHL26Q53HC5 615 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 METTL21CQ5VZV1 264 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 TNFAIP8L2Q6P589 184 aaPredicted RBP16.76■□□□□ 0.27
CPSF2-202ENST00000553427 XKRXQ6PP77 449 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 ZNF621Q6ZSS3 439 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 MTERF4Q7Z6M4 381 aaKnown RBP16.76■□□□□ 0.27
CPSF2-202ENST00000553427 IFNEQ86WN2 208 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 ULK2Q8IYT8 1036 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 OR5M9Q8NGP3 310 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 OR14L1PQ8NHC6 308 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 ZFP90Q8TF47 636 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 GTF2H4Q92759 462 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 C1GALT1C1Q96EU7 318 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 UGT2B28Q9BY64 529 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 TNFRSF10DQ9UBN6 386 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 SLC6A5Q9Y345 797 aa16.76■□□□□ 0.27
CPSF2-202ENST00000553427 STX11O75558 287 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 OR12D1P0DN82 309 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 CHMP24386 653 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 GUCY1A3Q02108 690 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 ZNF630Q2M218 657 aaPredicted RBP16.75■□□□□ 0.27
CPSF2-202ENST00000553427 AAGABQ6PD74 315 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 C3P1Q6ZMU1 363 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 MAMDC2Q7Z304 686 aaPredicted RBP16.75■□□□□ 0.27
CPSF2-202ENST00000553427 C16orf62Q7Z3J2 963 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 RNF130Q86XS8 419 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 MARVELD2Q8N4S9 558 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 ABTB1Q969K4 478 aaPredicted RBP16.75■□□□□ 0.27
CPSF2-202ENST00000553427 VPS33AQ96AX1 596 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 SPDL1Q96EA4 605 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 SLC52A3Q9NQ40 469 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 MRGBPQ9NV56 204 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 FGFR1OP2Q9NVK5 253 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 MED11Q9P086 117 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 FAM215AQ9Y5M1 114 aa16.75■□□□□ 0.27
CPSF2-202ENST00000553427 A0A087WZY1 265 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 A0A0G2JND7 137 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 AHRRA9YTQ3 701 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 H3BNH8 94 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 LINC01387J3KSC0 135 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 HMGN4O00479 90 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 KIAA0513O60268 411 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 GSNP06396 782 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 CPN1P15169 458 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 HOXB9P17482 250 aaPredicted RBP16.74■□□□□ 0.27
CPSF2-202ENST00000553427 MDH1P40925 334 aaKnown RBP16.74■□□□□ 0.27
CPSF2-202ENST00000553427 B3GALT5-AS1P59052 145 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 FUT5Q11128 374 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 ART3Q13508 389 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 SF3B4Q15427 424 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPSF2-202ENST00000553427 CD226Q15762 336 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 ZNF141Q15928 474 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 TMEM44Q2T9K0 475 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPSF2-202ENST00000553427 C1orf185Q5T7R7 199 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 RTL6Q6ICC9 239 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 ZNF585AQ6P3V2 769 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 ENPP6Q6UWR7 440 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
CPSF2-202ENST00000553427 B3GNT6Q6ZMB0 384 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 MRGPRGQ86SM5 289 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 THOC1Q96FV9 657 aaKnown RBP16.74■□□□□ 0.27
CPSF2-202ENST00000553427 WDYHV1Q96HA8 205 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 SAP130Q9H0E3 1048 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 SLC6A13Q9NSD5 602 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 CCDC167Q9P0B6 97 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 LIPT1Q9Y234 373 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 DTNAQ9Y4J8 743 aa16.74■□□□□ 0.27
CPSF2-202ENST00000553427 FREM3P0C091 2139 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 PCNX1Q96RV3 2341 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 A0A096LPI6 279 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 C7orf72A4D263 438 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 FAM47E-STBD1D6RA91 191 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 NR5A2O00482 541 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 CLDN1O95832 211 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 GP1BBP13224 206 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 MVDP53602 400 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 SUMO3P55854 103 aaPredicted RBP16.73■□□□□ 0.27
CPSF2-202ENST00000553427 BCL2A1Q16548 175 aa16.73■□□□□ 0.27
CPSF2-202ENST00000553427 ACSF3Q4G176 576 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms