RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 HBMQ6B0K9 141 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 NUFIP2Q7Z417 695 aaKnown RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 OR2L13Q8N349 312 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 GTPBP8Q8N3Z3 284 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 GATSQ8NAP1 163 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 CDC26Q8NHZ8 85 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 ABHD3Q8WU67 409 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 ROBO4Q8WZ75 1007 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 C11orf24Q96F05 449 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 LMF2Q9BU23 707 aaKnown RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 C1QTNF3Q9BXJ4 246 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 TRIM2Q9C040 744 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 ESRP2Q9H6T0 727 aaKnown RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 LRTM1Q9HBL6 345 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 BARX1Q9HBU1 254 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 DDX18Q9NVP1 670 aaKnown RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 PAQR5Q9NXK6 330 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 STOML1Q9UBI4 398 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 A0A1W2PRB8 838 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 DPRXA6NFQ7 191 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 RAMP1O60894 148 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 OXSR1O95747 527 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 ADAP00813 363 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 KRT6AP02538 564 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 KRT6BP04259 564 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 DDCP20711 480 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 ADH6P28332 368 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 GABRA3P34903 492 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 HSD17B3P37058 310 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 KRT6CP48668 564 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 PSMD4P55036 377 aaKnown RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 C21orf58P58505 322 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 RAC1P63000 192 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 CAV1Q03135 178 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 CLCQ05315 142 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 BTKQ06187 659 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 RASA2Q15283 850 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 ZNHIT3Q15649 155 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF239Q16600 458 aaKnown RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 TSNAXIP1Q2TAA8 658 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 TMEM249Q2WGJ8 235 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 SPIN4Q56A73 249 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 SFRP5Q5T4F7 317 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 DNAJC14Q6Y2X3 702 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 ESPNLQ6ZVH7 1005 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 DTX2Q86UW9 622 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 EXOC3L1Q86VI1 746 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 TUSC5Q8IXB3 177 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 TMEM151AQ8N4L1 468 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 BANPQ8N9N5 519 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 SPATA4Q8NEY3 305 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 OR4C3Q8NH37 302 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 POC1BQ8TC44 478 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 PIWIL2Q8TC59 973 aaKnown RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 RNF128Q8TEB7 428 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 PIK3R3Q92569 461 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 OSTF1Q92882 214 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 KISS1RQ969F8 398 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 RHNO1Q9BSD3 238 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 C19orf24Q9BVV8 132 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 HDHD5Q9BXW7 423 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 SRXN1Q9BYN0 137 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 POTEKPQ9BYX7 375 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 MRPL46Q9H2W6 279 aaKnown RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 GLIPR2Q9H4G4 154 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 ALG2Q9H553 416 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 NGBQ9NPG2 151 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 EQTNQ9NQ60 294 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 MED17Q9NVC6 651 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 MRTO4Q9UKD2 239 aaKnown RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 CDC42EP3Q9UKI2 254 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 B3GALT5Q9Y2C3 310 aa8.07□□□□□ -1.12
SYNE2-209ENST00000553308 UTP11Q9Y3A2 253 aaKnown RBP8.07□□□□□ -1.12
SYNE2-209ENST00000553308 A0A087WZY1 265 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 FAM234BA2RU67 622 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 C7orf72A4D263 438 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SHISA9B4DS77 424 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ALG1L2C9J202 215 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 HAX1O00165 279 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 NDUFB5O43674 189 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ULK1O75385 1050 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SUPT7LO94864 414 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SLITRK5O94991 958 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 KCNH1O95259 989 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ANXA4P09525 319 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF16P17020 682 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ME2P23368 584 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 HMOX2P30519 316 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 NTSP30990 170 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SFTPDP35247 375 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF41P51814 821 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 NUDT6P53370 316 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 CASP9P55211 416 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 CDH11P55287 796 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 IRX1P78414 480 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-209ENST00000553308 SLC18A2Q05940 514 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 ZNF763Q0D2J5 394 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 C2orf80Q0P641 193 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 UNC50Q53HI1 259 aa8.06□□□□□ -1.12
SYNE2-209ENST00000553308 TMEM201Q5SNT2 666 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms