RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 HPCAP84074 193 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 C17orf67Q0P5P2 114 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 STX5Q13190 355 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 TOMM20Q15388 145 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 C3AR1Q16581 482 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 GTDC1Q4AE62 458 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 NHSL2Q5HYW2 709 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 MTFR2Q6P444 385 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 APOOLQ6UXV4 268 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 MTERF4Q7Z6M4 381 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 MARCH3Q86UD3 253 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 EID3Q8N140 333 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 OR2M3Q8NG83 312 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 OR4C3Q8NH37 302 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 SARAFQ96BY9 339 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 SDF2Q99470 211 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 RAD21L1Q9H4I0 556 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 EXO5Q9H790 373 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 TPT1P8Q9HAU6 139 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 THUMPD1Q9NXG2 353 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 SPRR3Q9UBC9 169 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 ERRFI1Q9UJM3 462 aaPredicted RBP10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 FBXL2Q9UKC9 423 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 MRPS18CQ9Y3D5 142 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 GMEB1Q9Y692 573 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 ICE1Q9Y2F5 2266 aa10.66□□□□□ -0.7
TRAFD1-209ENST00000552896 TRBV5-3A0A0A0MS03 114 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 FIGNL2A6NMB9 653 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 C17orf51A8MQB3 221 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 LRRTM2O43300 516 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 ZIC2O95409 532 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 C1QCP02747 245 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 PPIBP23284 216 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 LSP1P33241 339 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 GCKP35557 465 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 ATP12AP54707 1039 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 DSCR4P56555 118 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 CRYZQ08257 329 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 FADDQ13158 208 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 UBAP2LQ14157 1087 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 ZNF141Q15928 474 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 ZNF630Q2M218 657 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 KLHL26Q53HC5 615 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 EIPR1Q53HC9 387 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 COX20Q5RI15 118 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 AP1ARQ63HQ0 302 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 OR5M10Q6IEU7 315 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 IFNEQ86WN2 208 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 MED12LQ86YW9 2145 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 OR14L1PQ8NHC6 308 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 PNPT1Q8TCS8 783 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 SSC4DQ8WTU2 575 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 XAGE5Q8WWM1 108 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 RAB8BQ92930 207 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 ROPN1LQ96C74 230 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 C1GALT1C1Q96EU7 318 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 AURKBQ96GD4 344 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 TRNT1Q96Q11 434 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 SAP130Q9H0E3 1048 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 NSRP1Q9H0G5 558 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 TP63Q9H3D4 680 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 PTGES2Q9H7Z7 377 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 P2RX2Q9UBL9 471 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 SUCOQ9UBS9 1254 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 LEF1Q9UJU2 399 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 LIPT1Q9Y234 373 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 PCDHB14Q9Y5E9 798 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 MPDZO75970 2070 aa10.65□□□□□ -0.7
TRAFD1-209ENST00000552896 INTS1Q8N201 2190 aaKnown RBP10.65□□□□□ -0.71
TRAFD1-209ENST00000552896 C15orf38-AP3S2A0A0A6YYH1 394 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 NPIPA5A0A0B4J1W7 369 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 NPIPA2E9PIF3 369 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 NPIPA7E9PJI5 369 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 E9PLN8 166 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 NPIPA3F8WFD2 350 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 H3BNH8 94 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 ANGPT2O15123 496 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 SLC22A2O15244 555 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNHIT1O43257 154 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 WDR1O75083 606 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 TNFRSF21O75509 655 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 ACTL6AO96019 429 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 LDLRP01130 860 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 NPIPA8P0DM63 369 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DPP4P27487 766 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 MSX1P28360 303 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 ADSLP30566 484 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 SUMO3P55854 103 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DSTNP60981 165 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 CD226Q15762 336 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 EMC4Q5J8M3 183 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 PAGE3Q5JUK9 113 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 WIPI1Q5MNZ9 446 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 WLSQ5T9L3 541 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 TYW3Q6IPR3 259 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 FRRS1Q6ZNA5 592 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 SPATA21Q7Z572 469 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 FJX1Q86VR8 437 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DOLPP1Q86YN1 238 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms