RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MRPS18AQ9NVS2 196 aaKnown RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 UCKL1Q9NWZ5 548 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 EPHA6Q9UF33 1036 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ABCA7Q8IZY2 2146 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 PCDH15Q96QU1 1955 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 LOC100506127A0A0U1RQW1 187 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 RHPN2P1A8MT19 583 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ARHGAP33O14559 1287 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 PRODHO43272 600 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CSO75390 466 aaKnown RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 CDC123O75794 336 aaPredicted RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 SCG5P05408 212 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 DRD5P21918 477 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 SSTR4P31391 388 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 IDUAP35475 653 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CSNK1EP49674 416 aaKnown RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 RNF144AP50876 292 aaPredicted RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 SPHARQ15513 63 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 KLHL22Q53GT1 634 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 TCTE1Q5JU00 501 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CLEC12AQ5QGZ9 265 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF620Q6ZNG0 422 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 RNF113BQ8IZP6 322 aaKnown RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 CLDN22Q8N7P3 220 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 PROKR2Q8NFJ6 384 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 OR4Q3Q8NH05 313 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 MMABQ96EY8 250 aaPredicted RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 ZDHHC12Q96GR4 267 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 DACH2Q96NX9 599 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 DGAT2Q96PD7 388 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CHCHD6Q9BRQ6 235 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 WDR12Q9GZL7 423 aaKnown RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 SPRTNQ9H040 489 aaPredicted RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 IRAK4Q9NWZ3 460 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF223Q9UK11 482 aaPredicted RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 DIMT1Q9UNQ2 313 aaKnown RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 B3GNT3Q9Y2A9 372 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 KDM4EB2RXH2 506 aaPredicted RBP12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 HRKO00198 91 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 PIAS2O75928 621 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 RAB36O95755 333 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 EPHA4P54764 986 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 GAS1P54826 345 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 PLAURQ03405 335 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 SSX1Q16384 188 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 NKAIN2Q5VXU1 208 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 WDR88Q6ZMY6 472 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 IGFN1Q86VF2 1251 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 C11orf74Q86VG3 221 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 CYP4Z2PQ8N1L4 340 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 TMCO5AQ8N6Q1 288 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 ANKK1Q8NFD2 765 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 KBTBD8Q8NFY9 601 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 SPACA7Q96KW9 195 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 VSTM2LQ96N03 204 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 FGF20Q9NP95 211 aaPredicted RBP12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 GPR52Q9Y2T5 361 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 CDH10Q9Y6N8 788 aa12.99□□□□□ -0.33
RAB3IP-216ENST00000552199 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 OR2W5A6NFC9 320 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 SNTNA6NMZ2 147 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 CDC42EP2O14613 210 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 SURF4O15260 269 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 IGKV1D-16P01601 117 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 BCKDHBP21953 392 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 RFX3P48380 749 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF267Q14586 743 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 PGGHGQ32M88 737 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 TIMM50Q3ZCQ8 353 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 SOWAHCQ53LP3 525 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 PDZK1Q5T2W1 519 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 SLC30A6Q6NXT4 461 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 Q6ZNX1 250 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 OR4N2Q8NGD1 307 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 OR51Q1Q8NH59 317 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 MCFD2Q8NI22 146 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 CNOT9Q92600 299 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 CD180Q99467 661 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF559Q9BR84 538 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 TEX12Q9BXU0 123 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 RNF167Q9H6Y7 350 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 HHATLQ9HCP6 504 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 C14orf105Q9NVL8 296 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 LRIT1Q9P2V4 623 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 TMEM184BQ9Y519 407 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 RNF215Q9Y6U7 377 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 TP53BP1Q12888 1972 aaPredicted RBP12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 hCG_2014768A0A024R1R8 64 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 IRGMA1A4Y4 181 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 UNC119BA6NIH7 251 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 METTL15A6NJ78 407 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 H0YIG0 161 aa12.98□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF749O43361 778 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms