RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PRSS53Q2L4Q9 553 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 CCDC153Q494R4 210 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 CPTPQ5TA50 214 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 ZYG11AQ6WRX3 759 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 SH2D5Q6ZV89 423 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 ESPNLQ6ZVH7 1005 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 SZRD1Q7Z422 152 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 CIARTQ8N365 385 aaPredicted RBP20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 GTPBP8Q8N3Z3 284 aaPredicted RBP20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 OR6Y1Q8NGX8 325 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 ACTRT2Q8TDY3 377 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 SLC9A6Q92581 669 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 MARK4Q96L34 752 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 HS3ST6Q96QI5 342 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 TIGARQ9NQ88 270 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 TBK1Q9UHD2 729 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 GPR52Q9Y2T5 361 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 HIVEP2P31629 2446 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 VPS13CQ709C8 3753 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 GXYLT2A0PJZ3 443 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 UBFD1O14562 309 aaKnown RBP20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 SS18L1O75177 396 aaPredicted RBP20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 HSPA4LO95757 839 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 NGFRP08138 427 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 PCSK6P29122 969 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 SERPINB4P48594 390 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 TMEM44Q2T9K0 475 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 ZNF704Q6ZNC4 412 aaPredicted RBP20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 ZNF551Q7Z340 670 aaPredicted RBP20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 GGNQ86UU5 652 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 EXOC3L1Q86VI1 746 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 CCDC63Q8NA47 563 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 NUP43Q8NFH3 380 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 PIK3R3Q92569 461 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 C1orf109Q9NX04 203 aa20.68■□□□□ 0.9
SMARCD1-209ENST00000550477 SCDO00767 359 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 NKX2-2O95096 273 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 OXSR1O95747 527 aaPredicted RBP20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 CHEK2O96017 543 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 TUBBP07437 444 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 DNAJB13P59910 316 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 ZCCHC12Q6PEW1 402 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 APOOLQ6UXV4 268 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 STAC2Q6ZMT1 411 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 FRMD7Q6ZUT3 714 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 LRRN4CLQ8ND94 238 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 PPCDCQ96CD2 204 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 ZNF764Q96H86 408 aaPredicted RBP20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 TACO1Q9BSH4 297 aaKnown RBP20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 HDHD5Q9BXW7 423 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 NGBQ9NPG2 151 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 UBQLN4Q9NRR5 601 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 SH3BP4Q9P0V3 963 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 CLEC4AQ9UMR7 237 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 SNX8Q9Y5X2 465 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 ROS1P08922 2347 aa20.67■□□□□ 0.9
SMARCD1-209ENST00000550477 TRIM64A6NGJ6 449 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 TRIM64BA6NI03 449 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 SHISA8B8ZZ34 492 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 ADAMDEC1O15204 470 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 CXCL13O43927 109 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 ALOX5P09917 674 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 PRPH2P23942 346 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 EIF1P41567 113 aaKnown RBP20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 HBMQ6B0K9 141 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 WFDC8Q8IUA0 241 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 OR2V1Q8NHB1 315 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 PPP1R14CQ8TAE6 165 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 PLPPR2Q96GM1 343 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 EGLN2Q96KS0 407 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 MS4A4EQ96PG1 132 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 ACTR6Q9GZN1 396 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 REEP4Q9H6H4 257 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 LRTM1Q9HBL6 345 aa20.66■□□□□ 0.9
SMARCD1-209ENST00000550477 NSD1Q96L73 2696 aaPredicted RBP20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 A0A1W2PRB8 838 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 C7orf72A4D263 438 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 G3V2L1 256 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 KLF4O43474 513 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 PAX1P15863 534 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 LOXP28300 417 aaPredicted RBP20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 SLC6A8P48029 635 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 PRIM2P49643 509 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 CARD18P57730 90 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 SLC18A2Q05940 514 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 TMEM201Q5SNT2 666 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 ZNF611Q8N823 705 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 STEAP2Q8NFT2 490 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 OR4C3Q8NH37 302 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 HOXB13Q92826 284 aaPredicted RBP20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 OSTF1Q92882 214 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 CCT7Q99832 543 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 ACSS1Q9NUB1 689 aaPredicted RBP20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 MED17Q9NVC6 651 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 MID2Q9UJV3 735 aa20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 FN1P02751 2386 aaKnown RBP20.65■□□□□ 0.9
SMARCD1-209ENST00000550477 GJE1A6NN92 205 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 TNFSF11O14788 317 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms