RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CISD2Q8N5K1 135 aaKnown RBP11.91□□□□□ -0.5
RAB5C-206ENST00000550406 RBM15BQ8NDT2 890 aaKnown RBP11.91□□□□□ -0.5
RAB5C-206ENST00000550406 DUSP19Q8WTR2 217 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 ECSITQ9BQ95 431 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 DOHHQ9BU89 302 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 HOXD1Q9GZZ0 328 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 MTHFD2LQ9H903 347 aaPredicted RBP11.91□□□□□ -0.5
RAB5C-206ENST00000550406 KLRF1Q9NZS2 232 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.91□□□□□ -0.5
RAB5C-206ENST00000550406 TMEM181Q9P2C4 612 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 PACSIN3Q9UKS6 424 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 CHST2Q9Y4C5 530 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 WIF1Q9Y5W5 379 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 C15orf38-AP3S2A0A0A6YYH1 394 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 A0A0G2JPF8 293 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 A0A1W2PQD3 144 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 AGAP5A6NIR3 686 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 HNRNPCL2B2RXH8 293 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 HNRNPCL3B7ZW38 293 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 GNB5O14775 395 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 SNPHO15079 494 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 HNRNPCL1O60812 293 aaKnown RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 SNX4O95219 450 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 RASAL1O95294 804 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 ANGPTL1O95841 491 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 HNRNPCL4P0DMR1 293 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 MST1P26927 711 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 GSK3BP49841 420 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 CRISP3P54108 245 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 PCBP3P57721 371 aaKnown RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 KCNJ2P63252 427 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 LIPEQ05469 1076 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 BNIP1Q12981 228 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 CYP51A1Q16850 503 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 ZNF630Q2M218 657 aaPredicted RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 HYAL4Q2M3T9 481 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 VMACQ2NL98 169 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 PRAMEF8Q5VWM4 474 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 PRAMEF7Q5VXH5 474 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 ZNF324BQ6AW86 544 aaPredicted RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 TIGD3Q6B0B8 471 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 OR5M10Q6IEU7 315 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 REEP3Q6NUK4 255 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 ARPINQ7Z6K5 226 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 PGAM4Q8N0Y7 254 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 METTL25Q8N6Q8 603 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 GATSQ8NAP1 163 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 C11orf65Q8NCR3 313 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 SLC7A6OSQ96CW6 309 aaPredicted RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 REXO5Q96IC2 774 aaKnown RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 GNRHR2Q96P88 292 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 BARD1Q99728 777 aaKnown RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 TTTY12Q9BZ98 90 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 ZFP64Q9NPA5 681 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 CALML5Q9NZT1 146 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 SUCOQ9UBS9 1254 aaKnown RBP11.9□□□□□ -0.5
RAB5C-206ENST00000550406 ANAPC2Q9UJX6 822 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 DTNAQ9Y4J8 743 aa11.9□□□□□ -0.5
RAB5C-206ENST00000550406 ZNF407Q9C0G0 2248 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 IGLV3-32A0A0A0MS00 114 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 CLDN24A6NM45 220 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 FAM220BPB1ANY3 271 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 SUV39H1O43463 412 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 PCGF2P35227 344 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 ADH7P40394 386 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 CRYBA2P53672 197 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 EEFSECP57772 596 aaKnown RBP11.89□□□□□ -0.51
RAB5C-206ENST00000550406 RBBP4Q09028 425 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 FGFBP1Q14512 234 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 INAQ16352 499 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 NDUFAF6Q330K2 333 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 PACS2Q86VP3 889 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 IFNEQ86WN2 208 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 VRK2Q86Y07 508 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 SIAH3Q8IW03 269 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 MICU2Q8IYU8 434 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 ZNF843Q8N446 348 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 TMEM251Q8N6I4 163 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 FADS6Q8N9I5 356 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 HIPK4Q8NE63 616 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 OR2M3Q8NG83 312 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 BBS10Q8TAM1 723 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 PMM1Q92871 262 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 ZNF524Q96C55 264 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 JSRP1Q96MG2 331 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-206ENST00000550406 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 SPATA9Q9BWV2 254 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 TBL1XR1Q9BZK7 514 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 UBQLN3Q9H347 655 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 DSN1Q9H410 356 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 ASF1BQ9NVP2 202 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 MED11Q9P086 117 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 CD300AQ9UGN4 299 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 FBXL2Q9UKC9 423 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 L3MBTL1Q9Y468 752 aa11.89□□□□□ -0.51
RAB5C-206ENST00000550406 GPC6Q9Y625 555 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms