RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CNOT1A5YKK6 2376 aaKnown RBP14.05□□□□□ -0.16
CUX1-214ENST00000550008 PARP14Q460N5 1801 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 OR2W5A6NFC9 320 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 NPIPA5E9PKD4 350 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 HTR1AP08908 422 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 ADH7P40394 386 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 GXYLT1Q4G148 440 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 MTFR2Q6P444 385 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 SYCE2Q6PIF2 218 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 RSC1A1Q92681 617 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 MUL1Q969V5 352 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 RSPRY1Q96DX4 576 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 HS6ST2Q96MM7 605 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 EVA1BQ9NVM1 165 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 CLEC2DQ9UHP7 191 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 NPIPA1Q9UND3 350 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 PRODHO43272 600 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 EEF1E1O43324 174 aaKnown RBP14.05□□□□□ -0.16
CUX1-214ENST00000550008 AP1G1O43747 822 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 IFNA6P05013 189 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 KLK3P07288 261 aaPredicted RBP14.05□□□□□ -0.16
CUX1-214ENST00000550008 LIPAP38571 399 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 DPTQ07507 201 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 CDKN3Q16667 212 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 LIN54Q6MZP7 749 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 ZNF619Q8N2I2 560 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 MFSD9Q8NBP5 474 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 OR8H1Q8NGG4 311 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 OR13C2Q8NGS9 318 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 NR4A3Q92570 626 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
CUX1-214ENST00000550008 LRRC3BQ96PB8 259 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 OTOL1A6NHN0 477 aaPredicted RBP14.04□□□□□ -0.16
CUX1-214ENST00000550008 SLC22A31A6NKX4 558 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 TRIM64CA6NLI5 447 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 CASC3O15234 703 aaKnown RBP14.04□□□□□ -0.16
CUX1-214ENST00000550008 FCMRO60667 390 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 C4BPBP20851 252 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 CD38P28907 300 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 CXCR4P61073 352 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 KCNJ10P78508 379 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ANKRD13BQ86YJ7 626 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 RIMKLAQ8IXN7 391 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 DAZLQ92904 295 aaKnown RBP14.04□□□□□ -0.16
CUX1-214ENST00000550008 MR1Q95460 341 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 MS4A6EQ96DS6 147 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 SLC6A18Q96N87 628 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 UNC13CQ8NB66 2214 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 KIR2DS5A0A0G2JLQ3 304 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 A0A0G2JNG1 304 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 C9J4A7 227 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 KIR2DS3K7RE56 304 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 SLC16A6O15403 523 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 FBXO45P0C2W1 286 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ELAVL4P26378 380 aaKnown RBP14.04□□□□□ -0.16
CUX1-214ENST00000550008 ADAM15Q13444 863 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 KIR2DS5Q14953 304 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 LEG1Q6P5S2 330 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ANKRD53Q8N9V6 530 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 TBC1D15Q8TC07 691 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 SPRYD4Q8WW59 207 aaPredicted RBP14.04□□□□□ -0.16
CUX1-214ENST00000550008 ELP4Q96EB1 424 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 GINS4Q9BRT9 223 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 OCEL1Q9H607 264 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ANKRD28O15084 1053 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 PRKCAP17252 672 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 FUT1P19526 365 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 KCNJ5P48544 419 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ERVK-25P63136 954 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 HYAL4Q2M3T9 481 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 AGBL4Q5VU57 503 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 NKAIN2Q5VXU1 208 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ALG8Q9BVK2 526 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 PLA2G2FQ9BZM2 168 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 PADI2Q9Y2J8 665 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 PCDHGB6Q9Y5F9 930 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ZNF726A6NNF4 738 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 PKLRP30613 574 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 PSMB10P40306 273 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 EPHA5P54756 1037 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 INAVAQ3KP66 663 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 ZNF443Q9Y2A4 671 aaPredicted RBP14.04□□□□□ -0.16
CUX1-214ENST00000550008 PCDHGA6Q9Y5G7 932 aa14.04□□□□□ -0.16
CUX1-214ENST00000550008 PTPRFP10586 1907 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 IGLV3-16A0A075B6K0 115 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 FUOMA2VDF0 154 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 ZNF879B4DU55 563 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 ARHGAP33O14559 1287 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 PEPDP12955 493 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 OR1Q1Q15612 314 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 SLC48A1Q6P1K1 146 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 AMER3Q8N944 861 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 OR2A1Q8NGT9 310 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 FRMD6Q96NE9 622 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 SDHAF3Q9NRP4 125 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 LRIT1Q9P2V4 623 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 ICKQ9UPZ9 632 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 VDAC3Q9Y277 283 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 TVP23AA6NH52 213 aa14.03□□□□□ -0.16
CUX1-214ENST00000550008 ZNF701M0R085 212 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms