RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 DPH1Q9BZG8 443 aa13.19□□□□□ -0.3
RAPGEF3-218ENST00000548919 PAK6Q9NQU5 681 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF3-218ENST00000548919 NUDT15Q9NV35 164 aa13.19□□□□□ -0.3
RAPGEF3-218ENST00000548919 NCKAP1Q9Y2A7 1128 aa13.19□□□□□ -0.3
RAPGEF3-218ENST00000548919 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 J3QRE1 110 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SYT5O00445 386 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 EMC8O43402 210 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 KLF4O43474 513 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SYPP08247 313 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 MRPL3P09001 348 aaKnown RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 NDUFV2P19404 249 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 CSNK2A2P19784 350 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 PTBP1P26599 531 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 BTCP35070 178 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 HSD17B2P37059 387 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SLC16A1P53985 500 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ATP12AP54707 1039 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 KLHL12Q53G59 568 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 PLA1AQ53H76 456 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SMUG1Q53HV7 270 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 FAM111BQ6SJ93 734 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 RPTNQ6XPR3 784 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 FAM109AQ8N4B1 249 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 OR10H4Q8NGA5 316 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 OR8H1Q8NGG4 311 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 OR5M3Q8NGP4 307 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 HSD17B8Q92506 261 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ABHD1Q96SE0 405 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SLC6A20Q9NP91 592 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 MBNL1Q9NR56 388 aaKnown RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 CYSLTR2Q9NS75 346 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 BABAM2Q9NXR7 383 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 CES1P1Q9UKY3 287 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 NARSO43776 548 aaKnown RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 NOS1APO75052 506 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 LINC00271P0C7V0 271 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 F3P13726 295 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 THBS2P35442 1172 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 E2F1Q01094 437 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZNF234Q14588 700 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 TCEA2Q15560 299 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 SLC48A1Q6P1K1 146 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 MBOAT2Q6ZWT7 520 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ACBD7Q8N6N7 88 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 CDS1Q92903 461 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZNF624Q9P2J8 865 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZNF222Q9UK12 451 aa13.18□□□□□ -0.3
RAPGEF3-218ENST00000548919 EDDM13A0A1B0GTR0 161 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 EPCAMP16422 314 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 PAICSP22234 425 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 CFL1P23528 166 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 FXYD6P3P58550 94 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 CAMK1Q14012 370 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZIC1Q15915 447 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 SLC25A35Q3KQZ1 300 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 TMEM52BQ4KMG9 183 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 HBMQ6B0K9 141 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 OR11H7Q8NGC8 314 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 TTTY10Q9BZA0 68 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 MED28Q9H204 178 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 MRPS30Q9NP92 439 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 KLHL1Q9NR64 748 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 C20orf141Q9NUB4 165 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZSCAN5BA6NJL1 495 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 HYAL3O43820 417 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 PRG2P13727 222 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 IFNA8P32881 189 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 MPIP34949 423 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 TALDO1P37837 337 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 PITPNBP48739 271 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 MTNR1BP49286 362 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 SIGIRRQ6IA17 410 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 MRM1Q6IN84 353 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZNF767PQ75MW2 155 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 LRRC28Q86X40 367 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 PFN4Q8NHR9 129 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 SUN5Q8TC36 379 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 OTUB2Q96DC9 234 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 GIMAP5Q96F15 307 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 KCNN2Q9H2S1 579 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 MAT2BQ9NZL9 334 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
RAPGEF3-218ENST00000548919 A0A0B4J203 849 aa13.16□□□□□ -0.3
RAPGEF3-218ENST00000548919 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms