RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 B3GALT2O43825 422 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 ZIC2O95409 532 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 COL9A1P20849 921 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 RPL4P36578 427 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 SLC1A3P43003 542 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 RUNX2Q13950 521 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 GNA13Q14344 377 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF79Q15937 498 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 ATAD3CQ5T2N8 411 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MRPL2Q5T653 305 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 C12orf73Q69YU5 71 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 CXXC5Q7LFL8 322 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 TAF8Q7Z7C8 310 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MINDY2Q8NBR6 621 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 TTLQ8NG68 377 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 HCAR1Q9BXC0 346 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 A0A0G2JPF8 293 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 GXYLT2A0PJZ3 443 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 HYKKA2RU49 373 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MEIOCA2RUB1 952 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 TMEM221A6NGB7 291 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 HNRNPCL2B2RXH8 293 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 HNRNPCL3B7ZW38 293 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MRPS14O60783 128 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 CELA2BP08218 269 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 HNRNPCL4P0DMR1 293 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 SNRPGP62308 76 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MAT1AQ00266 395 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 GPR18Q14330 331 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 HYAL4Q2M3T9 481 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 ANKRD54Q6NXT1 300 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 VN1R4Q7Z5H5 301 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MORN4Q8NDC4 146 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 OR2L8Q8NGY9 312 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 FANK1Q8TC84 345 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 TMCO6Q96DC7 493 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 POLDIP3Q9BY77 421 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 ACTRT3Q9BYD9 372 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 SP140LQ9H930 580 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 SNX7Q9UNH6 387 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 TRAV6A0A075B6T7 132 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 OR6C70A6NIJ9 312 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 B4DGG1 531 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 RDH16O75452 317 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 IFNA16P05015 189 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 PYCR1P32322 319 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 PSPHP78330 225 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MLLT11Q13015 90 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 AGAP6Q5VW22 663 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 FAM98AQ8NCA5 519 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 OR2T33Q8NG76 320 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 OR4N2Q8NGD1 307 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 OR6K6Q8NGW6 343 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 GNPDA2Q8TDQ7 276 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 HCAR2Q8TDS4 363 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 AGAP4Q96P64 663 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 OR52D1Q9H346 318 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 FN3KQ9H479 309 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 MRPL15Q9P015 296 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 A0A1B0GVT2 93 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 CPNE3O75131 537 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 LIMS3P0CW19 117 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 LIMS4P0CW20 117 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 MAOBP27338 520 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 QPRTQ15274 297 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 FIGLAQ6QHK4 219 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 ZAR1Q86SH2 424 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 IZUMO1Q8IYV9 350 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 SIRT6Q8N6T7 355 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 SRFBP1Q8NEF9 429 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 SFXN1Q9H9B4 322 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 N6AMT1Q9Y5N5 214 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 FGF17O60258 216 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 PPP1R3DO95685 299 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 EGFP01133 1207 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 TP53P04637 393 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 MSL3P1P0C860 447 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 ACP2P11117 423 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 OR10A3P58181 314 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 TMEM35AQ53FP2 167 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 CCDC92Q53HC0 331 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 SNAP47Q5SQN1 464 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 MEDAGQ5VYS4 303 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 SYCE2Q6PIF2 218 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 KLHL36Q8N4N3 616 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 OR4K13Q8NH42 304 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 PIGKQ92643 395 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 ZMYND19Q96E35 227 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 C1QTNF7Q9BXJ2 289 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 PINK1Q9BXM7 581 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 NKX2-4Q9H2Z4 354 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 NDUFB11Q9NX14 153 aa12.74□□□□□ -0.37
PRPF40B-209ENST00000548825 DPM1O60762 260 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 NDUFV2P19404 249 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms