RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 C1QTNF3Q9BXJ4 246 aa7.6□□□□□ -1.19
TROAP-208ENST00000548817 IQCGQ9H095 443 aaKnown RBP7.6□□□□□ -1.19
TROAP-208ENST00000548817 RNF122Q9H9V4 155 aa7.6□□□□□ -1.19
TROAP-208ENST00000548817 DDX18Q9NVP1 670 aaKnown RBP7.6□□□□□ -1.19
TROAP-208ENST00000548817 PAQR5Q9NXK6 330 aaPredicted RBP7.6□□□□□ -1.19
TROAP-208ENST00000548817 DMGDHQ9UI17 866 aaKnown RBP7.6□□□□□ -1.19
TROAP-208ENST00000548817 GRID1Q9ULK0 1009 aa7.6□□□□□ -1.19
TROAP-208ENST00000548817 A0A087WUV0 522 aaPredicted RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 A0A087WV62 115 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 A0A087WZY1 265 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 NDUFB5O43674 189 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 GMFGO60234 142 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 IL33O95760 270 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 CGAP01215 116 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 FESP07332 822 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 PABPC4LP0CB38 370 aaKnown RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 HPGDP15428 266 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 DDCP20711 480 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 HNF1AP20823 631 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 IMPDH1P20839 514 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 ME2P23368 584 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 ACVR1BP36896 505 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 MAGEA12P43365 314 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 PKNOX1P55347 436 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 CLDN20P56880 219 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 LOXL1Q08397 574 aaPredicted RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 ZNF763Q0D2J5 394 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 VPS26BQ4G0F5 336 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 UNC50Q53HI1 259 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 TCHHL1Q5QJ38 904 aaPredicted RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 ZNF678Q5SXM1 525 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 ALKBH2Q6NS38 261 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 ADAM5Q6NVV9 412 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 TMEM107Q6UX40 140 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 BEND4Q6ZU67 534 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 MARCH3Q86UD3 253 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 WFDC8Q8IUA0 241 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 SLC22A9Q8IVM8 553 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 METTL25Q8N6Q8 603 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 OR6K3Q8NGY3 331 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 RNF138Q8WVD3 245 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 C1GALT1C1Q96EU7 318 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 APIPQ96GX9 242 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 REXO5Q96IC2 774 aaKnown RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 GMPPAQ96IJ6 420 aaPredicted RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 TMEM204Q9BSN7 226 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 EBPLQ9BY08 206 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 CDC42EP4Q9H3Q1 356 aaKnown RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 NGBQ9NPG2 151 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 PLSCR4Q9NRQ2 329 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 GLRX2Q9NS18 164 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 ZDHHC18Q9NUE0 388 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 ZNF180Q9UJW8 692 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 C19orf53Q9UNZ5 99 aaPredicted RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 WBP11Q9Y2W2 641 aaKnown RBP7.59□□□□□ -1.19
TROAP-208ENST00000548817 SNX8Q9Y5X2 465 aa7.59□□□□□ -1.19
TROAP-208ENST00000548817 PCNX3Q9H6A9 2034 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 A0A096LNT2 108 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 EXOC1LA0A1B0GW35 172 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 MYO1GB0I1T2 1018 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 H0YC42 278 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 UBFD1O14562 309 aaKnown RBP7.58□□□□□ -1.2
TROAP-208ENST00000548817 DLX3O60479 287 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 LMX1BO60663 402 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 UTS2O95399 124 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 ANGPTL1O95841 491 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 GSTA1P08263 222 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 CHN1P15882 459 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 ATP5F1P24539 256 aaPredicted RBP7.58□□□□□ -1.2
TROAP-208ENST00000548817 CCKARP32238 428 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 GABRA3P34903 492 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 GPC1P35052 558 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 ZNF41P51814 821 aaPredicted RBP7.58□□□□□ -1.2
TROAP-208ENST00000548817 TPD52P55327 224 aaPredicted RBP7.58□□□□□ -1.2
TROAP-208ENST00000548817 DSCR9P59020 149 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 RAE1P78406 368 aaKnown RBP7.58□□□□□ -1.2
TROAP-208ENST00000548817 PSG6Q00889 435 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
TROAP-208ENST00000548817 LCP2Q13094 533 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 CYB5R2Q6BCY4 276 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 GALNT18Q6P9A2 607 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 HDXQ7Z353 690 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 LCA5Q86VQ0 697 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 RELL1Q8IUW5 271 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 CCNYL1Q8N7R7 359 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 GOLGA6L1Q8N7Z2 621 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 STEAP2Q8NFT2 490 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 CEP70Q8NHQ1 597 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 GPR151Q8TDV0 419 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 ZFAND2BQ8WV99 257 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 PLPPR2Q96GM1 343 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 FMO2Q99518 471 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 RHNO1Q9BSD3 238 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 FUT8Q9BYC5 575 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 ACPTQ9BZG2 426 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 TIGARQ9NQ88 270 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 ZNF225Q9UK10 706 aa7.58□□□□□ -1.2
TROAP-208ENST00000548817 CLEC4AQ9UMR7 237 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms