RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 C20orf204Q6ZNR8 217 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 ZAR1Q86SH2 424 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 WFDC8Q8IUA0 241 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 NUP43Q8NFH3 380 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 ZFP28Q8NHY6 868 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 PPCDCQ96CD2 204 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 CHMP6Q96FZ7 201 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 MARK4Q96L34 752 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 RNF145Q96MT1 663 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 C12orf49Q9H741 205 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 SH3BP4Q9P0V3 963 aa18.26■□□□□ 0.51
SSH1-207ENST00000547862 MCTS1Q9ULC4 181 aaKnown RBP18.26■□□□□ 0.51
SSH1-207ENST00000547862 FN1P02751 2386 aaKnown RBP18.26■□□□□ 0.51
SSH1-207ENST00000547862 IGLV3-32A0A0A0MS00 114 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 FAM171A2A8MVW0 826 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 SYNGR4O95473 234 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 ZNF17P17021 662 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 LOXP28300 417 aaPredicted RBP18.25■□□□□ 0.51
SSH1-207ENST00000547862 ZNF41P51814 821 aaPredicted RBP18.25■□□□□ 0.51
SSH1-207ENST00000547862 SLC18A2Q05940 514 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 GLYR1Q49A26 553 aaPredicted RBP18.25■□□□□ 0.51
SSH1-207ENST00000547862 VPS26BQ4G0F5 336 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 WDR75Q8IWA0 830 aaKnown RBP18.25■□□□□ 0.51
SSH1-207ENST00000547862 OR6K3Q8NGY3 331 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 PPP1R14CQ8TAE6 165 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 MS4A4EQ96PG1 132 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 C1orf109Q9NX04 203 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 STOML1Q9UBI4 398 aa18.25■□□□□ 0.51
SSH1-207ENST00000547862 A0A1W2PRB8 838 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 RGS14O43566 566 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 PLIN3O60664 434 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 NKX2-2O95096 273 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 SHBGP04278 402 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 THBDP07204 575 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 HPGDP15428 266 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 SDC1P18827 310 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 PTH2RP49190 550 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 PCYT1AP49585 367 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 MANFP55145 182 aaKnown RBP18.24■□□□□ 0.51
SSH1-207ENST00000547862 TMEM44Q2T9K0 475 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 CCDC153Q494R4 210 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 GALNTL6Q49A17 601 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 CCNJQ5T5M9 372 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 COX18Q8N8Q8 333 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 CDRT4Q8N9R6 151 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 OR2T11Q8NH01 316 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 OR4C3Q8NH37 302 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 ARSGQ96EG1 525 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 ZBED6CLQ96FA7 236 aaPredicted RBP18.24■□□□□ 0.51
SSH1-207ENST00000547862 GMPPAQ96IJ6 420 aaPredicted RBP18.24■□□□□ 0.51
SSH1-207ENST00000547862 KLHDC3Q9BQ90 382 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 REEP4Q9H6H4 257 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 MED17Q9NVC6 651 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 WBP11Q9Y2W2 641 aaKnown RBP18.24■□□□□ 0.51
SSH1-207ENST00000547862 CCL27Q9Y4X3 112 aa18.24■□□□□ 0.51
SSH1-207ENST00000547862 TTC36A6NLP5 189 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 ALG1L2C9J202 215 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 H3BQF6 201 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 SLC28A1O00337 649 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 SS18L1O75177 396 aaPredicted RBP18.23■□□□□ 0.51
SSH1-207ENST00000547862 PLAUP00749 431 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 ME2P23368 584 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 SFTPDP35247 375 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 DUSP5Q16690 384 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 PLPPR5Q32ZL2 321 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 BEX5Q5H9J7 111 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 HBMQ6B0K9 141 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 ZNF704Q6ZNC4 412 aaPredicted RBP18.23■□□□□ 0.51
SSH1-207ENST00000547862 PLEKHM3Q6ZWE6 761 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 SLC16A11Q8NCK7 471 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 OR2V1Q8NHB1 315 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 CEP70Q8NHQ1 597 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 UBLCP1Q8WVY7 318 aaPredicted RBP18.23■□□□□ 0.51
SSH1-207ENST00000547862 CAVIN3Q969G5 261 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 CCT7Q99832 543 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 BDH2Q9BUT1 245 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 TXLNGYQ9BZA5 131 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 FBXO34Q9NWN3 711 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 BAIAP2L1Q9UHR4 511 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 ROS1P08922 2347 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 PRR14LQ5THK1 2151 aa18.23■□□□□ 0.51
SSH1-207ENST00000547862 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 A0A087WZY1 265 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 SCDO00767 359 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 COPEO14579 308 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 KCNK2O95069 426 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 ALOX5P09917 674 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 LINC00032P0C843 101 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 CPA3P15088 417 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 DNAJB13P59910 316 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 NAA20P61599 178 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 KIAA0040Q15053 153 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 CTU2Q2VPK5 515 aaKnown RBP18.22■□□□□ 0.51
SSH1-207ENST00000547862 LIPMQ5VYY2 423 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 MFSD12Q6NUT3 480 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 STAC2Q6ZMT1 411 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 DDIASQ8IXT1 998 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 C4orf33Q8N1A6 199 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 GTPBP8Q8N3Z3 284 aaPredicted RBP18.22■□□□□ 0.51
SSH1-207ENST00000547862 GIMAP5Q96F15 307 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms