RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 DBF4BQ8NFT6 615 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PANX1Q96RD7 426 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 LYSMD1Q96S90 227 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 RSRP1Q9BUV0 290 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 GABARAPL3Q9BY60 117 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 WNT5BQ9H1J7 359 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 EPHA6Q9UF33 1036 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SLC22A14Q9Y267 594 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 DMRT1Q9Y5R6 373 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SPIN1Q9Y657 262 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 KIAA1549LQ6ZVL6 1849 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 FXYD6-FXYD2A0A087WZ82 144 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 C1orf226A1L170 272 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 FAM170BA6NMN3 283 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CLDN4O14493 209 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SOCS5O75159 536 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PAK4O96013 591 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 GP1BAP07359 652 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SULT1A3P0DMM9 295 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SULT1A4P0DMN0 295 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CSNK1DP48730 415 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 GPR143P51810 404 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PFN3P60673 137 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SMAD3P84022 425 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 OC90Q02509 493 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 MICBQ29980 383 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ZFP41Q8N8Y5 198 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 HJURPQ8NCD3 748 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 PXT1Q8NFP0 134 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 SETD7Q8WTS6 366 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 GTPBP3Q969Y2 492 aaKnown RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 RFT1Q96AA3 541 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 TMEM41AQ96HV5 264 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CDCA4Q9BXL8 241 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 FXYD6Q9H0Q3 95 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ALX4Q9H161 411 aaPredicted RBP7.39□□□□□ -1.23
UBR1-202ENST00000546274 C11orf16Q9NQ32 467 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 TREM2Q9NZC2 230 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 DNAJC27Q9NZQ0 273 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 CLEC4AQ9UMR7 237 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 PLEKHM1Q9Y4G2 1056 aa7.39□□□□□ -1.23
UBR1-202ENST00000546274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 A0A1W2PPE3 182 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 MAGEB17A8MXT2 336 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 NEDD8-MDP1E9PL57 170 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 GFYI3L273 518 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 SGK494L7N484 410 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 DPM1O60762 260 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 ABLIM3O94929 683 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 NQO2P16083 231 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 NFYBP25208 207 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 AQP1P29972 269 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 C21orf58P58505 322 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 PLA2G7Q13093 441 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 HABP2Q14520 560 aaPredicted RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 GINS1Q14691 196 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 FRG2Q64ET8 278 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 LYPD4Q6UWN0 246 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 IL20RBQ6UXL0 311 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 GDPGP1Q6ZNW5 385 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 DDX53Q86TM3 631 aaKnown RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 TMEM17Q86X19 198 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 CARFQ8N187 725 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 SVBPQ8N300 66 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 OR8J2Q8NGG1 315 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 FRG2BQ96QU4 278 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 SOX7Q9BT81 388 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 WASF3Q9UPY6 502 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 MTCL1Q9Y4B5 1905 aaKnown RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 GABRR3A8MPY1 467 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 KPNA3O00505 521 aaPredicted RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 STK25O00506 426 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 TPST2O60704 377 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 LAMP1P11279 417 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 SPI1P17947 270 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 PRPS1L1P21108 318 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 ITPKAP23677 461 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 ITGB7P26010 798 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 S100A11P31949 105 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 RAE1P78406 368 aaKnown RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 OR5M10Q6IEU7 315 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 ADNP2Q6IQ32 1131 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 BCDIN3DQ7Z5W3 292 aaKnown RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 NPAS4Q8IUM7 802 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 CAMKVQ8NCB2 501 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 DTD1Q8TEA8 209 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 HSD17B8Q92506 261 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 KAT2AQ92830 837 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 MRPL38Q96DV4 380 aaKnown RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 SENP5Q96HI0 755 aaPredicted RBP7.38□□□□□ -1.23
UBR1-202ENST00000546274 HS6ST2Q96MM7 605 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 DEFB118Q96PH6 123 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 EPYCQ99645 322 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 NIPSNAP1Q9BPW8 284 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 XKR8Q9H6D3 395 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 NTMQ9P121 344 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 MGAT4CQ9UBM8 478 aa7.38□□□□□ -1.23
UBR1-202ENST00000546274 CHST2Q9Y4C5 530 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms