RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NKAIN4Q8IVV8 208 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 TMEM99Q8N816 258 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 ACOT11Q8WXI4 607 aaPredicted RBP13.27□□□□□ -0.29
SRP54-202ENST00000546080 ZNF764Q96H86 408 aaPredicted RBP13.27□□□□□ -0.29
SRP54-202ENST00000546080 AHCYL2Q96HN2 611 aaKnown RBP13.27□□□□□ -0.29
SRP54-202ENST00000546080 ZNF578Q96N58 590 aaPredicted RBP13.27□□□□□ -0.29
SRP54-202ENST00000546080 ARHGDIGQ99819 225 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 C20orf85Q9H1P6 137 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 OR2AG1Q9H205 316 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 LRRN3Q9H3W5 708 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 ANKRD19PQ9H560 264 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 LHX9Q9NQ69 397 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 KCMF1Q9P0J7 381 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 HCN3Q9P1Z3 774 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 TAC3Q9UHF0 121 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 ASF1AQ9Y294 204 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 GPR55Q9Y2T6 319 aaPredicted RBP13.27□□□□□ -0.29
SRP54-202ENST00000546080 NPTNQ9Y639 398 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 SESN1Q9Y6P5 492 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 FEZF1A0PJY2 475 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 ZC3H12DA2A288 527 aaKnown RBP13.26□□□□□ -0.29
SRP54-202ENST00000546080 MANSC4A6NHS7 340 aaPredicted RBP13.26□□□□□ -0.29
SRP54-202ENST00000546080 SYT5O00445 386 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 NDUFS4O43181 175 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 SELPP16109 830 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 NDUFV2P19404 249 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 TBXA2RP21731 343 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 TRHRP34981 398 aaPredicted RBP13.26□□□□□ -0.29
SRP54-202ENST00000546080 AHRP35869 848 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 SELENOPP49908 381 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 BLVRAP53004 296 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 DBPQ10586 325 aaPredicted RBP13.26□□□□□ -0.29
SRP54-202ENST00000546080 SNTB2Q13425 540 aaKnown RBP13.26□□□□□ -0.29
SRP54-202ENST00000546080 SLC22A10Q63ZE4 541 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 PLBD1Q6P4A8 553 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 NRMQ8IXM6 262 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 ZNF527Q8NB42 609 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 ZBTB44Q8NCP5 570 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 RGMAQ96B86 450 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 IGSF21Q96ID5 467 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 SAMD8Q96LT4 415 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 BBS4Q96RK4 519 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 SPATA2Q9UM82 520 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 RWDD3Q9Y3V2 267 aa13.26□□□□□ -0.29
SRP54-202ENST00000546080 A0A0G2JN53 185 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 G3V3Q6 166 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 LEFTY2O00292 366 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 PIP5K1CO60331 668 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 LILRB5O75023 590 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 HPXP02790 462 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 HMGN2P05204 90 aaKnown RBP13.25□□□□□ -0.29
SRP54-202ENST00000546080 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
SRP54-202ENST00000546080 CD53P19397 219 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 DRD5P21918 477 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 EPHA4P54764 986 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 SLC7A9P82251 487 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 OPCMLQ14982 345 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 DECR1Q16698 335 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 NIPAL3Q6P499 406 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 LIPIQ6XZB0 460 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 KANSL1Q7Z3B3 1105 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 C11orf96Q7Z7L8 435 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 CMIPQ8IY22 773 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 OR10H4Q8NGA5 316 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 ABHD4Q8TB40 342 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 TOE1Q96GM8 510 aaKnown RBP13.25□□□□□ -0.29
SRP54-202ENST00000546080 NDC1Q9BTX1 674 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 NKIRAS2Q9NYR9 191 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 OR6C2Q9NZP2 312 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 EMC3Q9P0I2 261 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 RPS6KB2Q9UBS0 482 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 POMT2Q9UKY4 750 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 TRABD2BA6NFA1 517 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 NEDD8-MDP1E9PL57 170 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 KIAA0355O15063 1070 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 PEX14O75381 377 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 PPM1BO75688 479 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 MT-ND5P03915 603 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 WNT1P04628 370 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 ANKRD34CP0C6C1 535 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 RAB3BP20337 219 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 KELP23276 732 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 TAS2R38P59533 333 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 BTN1A1Q13410 526 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 NDUFAF5Q5TEU4 345 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 GET4Q7L5D6 327 aaPredicted RBP13.25□□□□□ -0.29
SRP54-202ENST00000546080 SLITRK4Q8IW52 837 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 UXS1Q8NBZ7 420 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 C7orf57Q8NEG2 295 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 OR5AR1Q8NGP9 310 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 ZFPM2Q8WW38 1151 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 RIT1Q92963 219 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 RAD51AP1Q96B01 352 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 LINC00052Q96N35 136 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 TIMP4Q99727 224 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 DPH7Q9BTV6 452 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 GSDMCQ9BYG8 508 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms