RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	TSSK3	Q96PN8	268 aa		21.33	■■□□□ 1.01
RAP1B-233	ENST00000545720	OXSM	Q9NWU1	459 aa		21.33	■■□□□ 1.01
RAP1B-233	ENST00000545720	STOML1	Q9UBI4	398 aa		21.33	■■□□□ 1.01
RAP1B-233	ENST00000545720	EMC9	Q9Y3B6	208 aa		21.33	■■□□□ 1.01
RAP1B-233	ENST00000545720	USF3	Q68DE3	2245 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	SMIM23	A6NLE4	172 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	ALG1L2	C9J202	215 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	SLC28A1	O00337	649 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	RGS14	O43566	566 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	NKX2-2	O95096	273 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	PLG	P00747	810 aa	Predicted RBP	21.32	■■□□□ 1
RAP1B-233	ENST00000545720	SHBG	P04278	402 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	CPA3	P15088	417 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	SDC1	P18827	310 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	MAP3K8	P41279	467 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	CCT5	P48643	541 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	FIGNL1	Q6PIW4	674 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	CDRT4	Q8N9R6	151 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	NUP43	Q8NFH3	380 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	OR2T11	Q8NH01	316 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	OR4C3	Q8NH37	302 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	OR10D3	Q8NH80	312 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	CEP70	Q8NHQ1	597 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	CLHC1	Q8NHS4	586 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	ZBED6CL	Q96FA7	236 aa	Predicted RBP	21.32	■■□□□ 1
RAP1B-233	ENST00000545720		Q96MF0	132 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	NPAS1	Q99742	590 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	CCT7	Q99832	543 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	REEP4	Q9H6H4	257 aa		21.32	■■□□□ 1
RAP1B-233	ENST00000545720	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720		H7C1Q1	480 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	OPN1LW	P04000	364 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	HEXA	P06865	529 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	ACP2	P11117	423 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	LOX	P28300	417 aa	Predicted RBP	21.31	■■□□□ 1
RAP1B-233	ENST00000545720	CRHR1	P34998	444 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	MANF	P55145	182 aa	Known RBP	21.31	■■□□□ 1
RAP1B-233	ENST00000545720	CTBP2	P56545	445 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	RPL38	P63173	70 aa	Known RBP	21.31	■■□□□ 1
RAP1B-233	ENST00000545720	LIPM	Q5VYY2	423 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	C20orf204	Q6ZNR8	217 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	ZAR1	Q86SH2	424 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	WDR75	Q8IWA0	830 aa	Known RBP	21.31	■■□□□ 1
RAP1B-233	ENST00000545720	CIART	Q8N365	385 aa	Predicted RBP	21.31	■■□□□ 1
RAP1B-233	ENST00000545720	OR6K3	Q8NGY3	331 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	KIF18A	Q8NI77	898 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	CAVIN3	Q969G5	261 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	GIMAP5	Q96F15	307 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	OTUB1	Q96FW1	271 aa	Predicted RBP	21.31	■■□□□ 1
RAP1B-233	ENST00000545720	ZNF764	Q96H86	408 aa	Predicted RBP	21.31	■■□□□ 1
RAP1B-233	ENST00000545720	COX4I2	Q96KJ9	171 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	MS4A4E	Q96PG1	132 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720	SH3BP4	Q9P0V3	963 aa		21.31	■■□□□ 1
RAP1B-233	ENST00000545720		A0A087WZY1	265 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	NPIPB8	E9PQR5	432 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	NGFR	P08138	427 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	EFNA1	P20827	205 aa	Predicted RBP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	SLC18A2	Q05940	514 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	YTHDF3	Q7Z739	585 aa	Known RBP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	SLC16A11	Q8NCK7	471 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	SH3YL1	Q96HL8	342 aa	Predicted RBP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	GMPPA	Q96IJ6	420 aa	Predicted RBP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	FCRL1	Q96LA6	429 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	RNF145	Q96MT1	663 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	IQCG	Q9H095	443 aa	Known RBP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	TMEM185B	Q9H7F4	350 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	BAIAP2L1	Q9UHR4	511 aa		21.3	■■□□□ 1
RAP1B-233	ENST00000545720	MCTS1	Q9ULC4	181 aa	Known RBP	21.3	■■□□□ 1
RAP1B-233	ENST00000545720	CSPG4	Q6UVK1	2322 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	JMJD1C	Q15652	2540 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720		A0A1W2PRB8	838 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	FAM171A2	A8MVW0	826 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	KIF2A	O00139	706 aa	Predicted RBP	21.29	■■□□□ 1
RAP1B-233	ENST00000545720	COPE	O14579	308 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	TNFSF11	O14788	317 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	AZIN1	O14977	448 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	KCNK2	O95069	426 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	LY6G6D	O95868	133 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	THBD	P07204	575 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	NEFH	P12036	1026 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	ZNF41	P51814	821 aa	Predicted RBP	21.29	■■□□□ 1
RAP1B-233	ENST00000545720	DUSP5	Q16690	384 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	CTU2	Q2VPK5	515 aa	Known RBP	21.29	■■□□□ 1
RAP1B-233	ENST00000545720	PLPPR5	Q32ZL2	321 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	MFSD12	Q6NUT3	480 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720		Q6ZSR9	355 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	C10orf107	Q8IVU9	208 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	UBLCP1	Q8WVY7	318 aa	Predicted RBP	21.29	■■□□□ 1
RAP1B-233	ENST00000545720	JADE3	Q92613	823 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	ARSG	Q96EG1	525 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	ADGRG7	Q96K78	797 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	TUBB1	Q9H4B7	451 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	HHATL	Q9HCP6	504 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	PLSCR4	Q9NRQ2	329 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	MED17	Q9NVC6	651 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	FBXO34	Q9NWN3	711 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	NTM	Q9P121	344 aa		21.29	■■□□□ 1
RAP1B-233	ENST00000545720	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms