RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IRF4Q15306 451 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 PODNL1Q6PEZ8 512 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 TAS1R1Q7RTX1 841 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 TPD52L2O43399 206 aaKnown RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 GRPRP30550 384 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 PRSS3P35030 304 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 NSDHLQ15738 373 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ANKRD54Q6NXT1 300 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 NLRP8Q86W28 1048 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 PMM1Q92871 262 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ABRACLQ9P1F3 81 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF337Q9Y3M9 751 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 HMX3A6NHT5 357 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 M0R129 80 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 HRGP04196 525 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 FUT1P19526 365 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 P2RY2P41231 377 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 C3orf33Q6P1S2 294 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF709Q8N972 641 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 SCGB1C1Q8TD33 95 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 FOXRED1Q96CU9 486 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 LPAR4Q99677 370 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 FAM86C1Q9NVL1 165 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ARAP2Q8WZ64 1704 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 SOX3P41225 446 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 PRKXP51817 358 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 SELPLGQ14242 412 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 CNOT9Q92600 299 aaKnown RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 VRK1Q99986 396 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 NHSL1Q5SYE7 1610 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 PAHP00439 452 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 RBMS1P29558 406 aaKnown RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 EIF2DP41214 584 aaKnown RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 MAP4K2Q12851 820 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 TSPAN31Q12999 210 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ZFP90Q8TF47 636 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 CDS1Q92903 461 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 BPIFA2Q96DR5 249 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 DCAF7P61962 342 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 C1orf94Q6P1W5 598 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 LRRC28Q86X40 367 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 SLC43A2Q8N370 569 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 GPR137CQ8N3F9 429 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 CHPT1Q8WUD6 406 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF583Q96ND8 569 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 OR1F2PQ96R84 312 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 PITX2Q99697 317 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 CD300AQ9UGN4 299 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 FBXL3Q9UKT7 428 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ATG12O94817 140 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 IFNA5P01569 189 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 SFTPBP07988 381 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF806P0C7X5 589 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ARSAP15289 507 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 RNF144AP50876 292 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 SELENOVP59797 346 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 KCTD12Q96CX2 325 aaKnown RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF486Q96H40 463 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 MSLNLQ96KJ4 702 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 DPCDQ9BVM2 203 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF334Q9HCZ1 680 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-209ENST00000545689 SLC39A1Q9NY26 324 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 NPAP1Q9NZP6 1156 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 PCP4L1A6NKN8 68 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 IFNA1P01562 189 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 CHMP24386 653 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 GNRHRP30968 328 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 GPR139Q6DWJ6 353 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 DESI1Q6ICB0 168 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 ARSKQ6UWY0 536 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM150AQ86TG1 271 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 OR5H2Q8NGV7 314 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 OR2T11Q8NH01 316 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 DEDD2Q8WXF8 326 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 A4GALTQ9NPC4 353 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 SRPK3Q9UPE1 567 aa11.78□□□□□ -0.52
COL4A6-209ENST00000545689 FAM155AB1AL88 458 aaPredicted RBP11.77□□□□□ -0.52
COL4A6-209ENST00000545689 ATE1O95260 518 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 TP53P04637 393 aaPredicted RBP11.77□□□□□ -0.52
COL4A6-209ENST00000545689 CPMP14384 443 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 NTHL1P78549 312 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 PDE7AQ13946 482 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.52
COL4A6-209ENST00000545689 RAET1LQ5VY80 246 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 MRPL43Q8N983 215 aaKnown RBP11.77□□□□□ -0.52
COL4A6-209ENST00000545689 OR5D16Q8NGK9 328 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.52
COL4A6-209ENST00000545689 PHB2Q99623 299 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 HIF3AQ9Y2N7 669 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 PRSS38A1L453 326 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 C7orf72A4D263 438 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 IFNA2P01563 188 aa11.77□□□□□ -0.52
COL4A6-209ENST00000545689 AMY2AP04746 511 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms