RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 RPL13AP3Q6NVV1 102 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ASB18Q6ZVZ8 466 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 C16orf62Q7Z3J2 963 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 PXKQ7Z7A4 578 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 GPR135Q8IZ08 494 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ZNF655Q8N720 491 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 OR5W2Q8NH69 310 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 GANCQ8TET4 914 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ADAMTS14Q8WXS8 1223 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ARRDC3Q96B67 414 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 CNRIP1Q96F85 164 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 ZSWIM3Q96MP5 696 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 MCHR1Q99705 422 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 C1QTNF2Q9BXJ5 285 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ACTR6Q9GZN1 396 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 AICDAQ9GZX7 198 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 QRSL1Q9H0R6 528 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 PPIL3Q9H2H8 161 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 UBQLN3Q9H347 655 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 HEXA-AS1Q9H8Q6 139 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ISG20L2Q9H9L3 353 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 NPFFR2Q9Y5X5 522 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 CSNK1G3Q9Y6M4 447 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 TRPM6Q9BX84 2022 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 MEIKINA0A087WXM9 373 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 TEX13CA0A0J9YWL9 993 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 ANKRD61A6NGH8 418 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 SLC22A31A6NKX4 558 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 AGRPO00253 132 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 FRS3O43559 492 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 LCMT2O60294 686 aaKnown RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 ERAL1O75616 437 aaKnown RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 SC5DO75845 299 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 IFNA7P01567 189 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 SERPIND1P05546 499 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 CISD3P0C7P0 127 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 UGT2B7P16662 529 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 POU3F3P20264 500 aaPredicted RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 HIST1H1TP22492 207 aaPredicted RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 PRDX1Q06830 199 aaKnown RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 TEAD2Q15562 447 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 UAP1L1Q3KQV9 507 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 EIPR1Q53HC9 387 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 CLLU1Q5K131 121 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 GPR139Q6DWJ6 353 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 HEPHL1Q6MZM0 1159 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 SLC48A1Q6P1K1 146 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 ADGRD2Q7Z7M1 963 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 CMIPQ8IY22 773 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 NUP43Q8NFH3 380 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 OR52L1Q8NGH7 329 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 TRMT10AQ8TBZ6 339 aaKnown RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 LRRC20Q8TCA0 184 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 OR8D1Q8WZ84 308 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 HSD17B8Q92506 261 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 C16orf58Q96GQ5 468 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 SAMD8Q96LT4 415 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 SORCS2Q96PQ0 1159 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 TIMP4Q99727 224 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 NDC1Q9BTX1 674 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 MFRPQ9BY79 579 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 ACTRT3Q9BYD9 372 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 ERVMER34-1Q9H9K5 563 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 CACYBPQ9HB71 228 aaKnown RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 POLMQ9NP87 494 aaPredicted RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 MAT2BQ9NZL9 334 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 ZNF222Q9UK12 451 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 CES1P1Q9UKY3 287 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 PCYT1BQ9Y5K3 369 aaPredicted RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 SIRT4Q9Y6E7 314 aaPredicted RBP8.16□□□□□ -1.1
TDP1-204ENST00000545686 KCNE3Q9Y6H6 103 aa8.16□□□□□ -1.1
TDP1-204ENST00000545686 TRAV6A0A075B6T7 132 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 A0A1W2PR48 441 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TUBAL3A6NHL2 446 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 DUXAA6NLW8 204 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 DVL2O14641 736 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 HYAL3O43820 417 aaPredicted RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 FZD7O75084 574 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TSC22D2O75157 780 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 MOSPD3O75425 235 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC2A10O95528 541 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 AIFM1O95831 613 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 PDGFAP04085 211 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC35G4P0C7Q5 338 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SULT1A3P0DMM9 295 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SULT1A4P0DMN0 295 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SAGP10523 405 aaPredicted RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 F3P13726 295 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SHC1P29353 583 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 MPIP34949 423 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 CA8P35219 290 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 AHRP35869 848 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 C9orf64Q5T6V5 341 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 PRPF38BQ5VTL8 546 aaKnown RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC22A10Q63ZE4 541 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 PLBD1Q6P4A8 553 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC38A6Q8IZM9 456 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TOMM5Q8N4H5 51 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms