RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 FAM45BPQ6NSW5 357 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 FAM180BQ6P0A1 224 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 NPSR1Q6W5P4 371 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 ANKMY2Q8IV38 441 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 CNTN4Q8IWV2 1026 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 FAM45AQ8TCE6 357 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 TMEM185BQ9H7F4 350 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 TXNDC16Q9P2K2 825 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 WBP11Q9Y2W2 641 aaKnown RBP13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 ATP23Q9Y6H3 246 aa13.53□□□□□ -0.24
CLSTN3-216ENST00000545663 ARFGEF3Q5TH69 2177 aa13.52□□□□□ -0.24
CLSTN3-216ENST00000545663 A0A0J9YW62 118 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 ADAMDEC1O15204 470 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 FADS1O60427 444 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 CCNT2O60583 730 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 DHRS4L1P0CG22 281 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 BMP4P12644 408 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 CD40P25942 277 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 IL12BP29460 328 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 ECHS1P30084 290 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 EVI2BP34910 448 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 DVL1P1P54792 670 aaPredicted RBP13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 E2F2Q14209 437 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 GANABQ14697 944 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 EMBQ6PCB8 327 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 TMEM108Q6UXF1 575 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 USP43Q70EL4 1123 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 ADAMTSL2Q86TH1 951 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 IGDCC3Q8IVU1 814 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 OR2V1Q8NHB1 315 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 FBF1Q8TES7 1133 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 FBXO17Q96EF6 278 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 USB1Q9BQ65 265 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 INPP5KQ9BT40 448 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 TRMOQ9BU70 441 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 C1QTNF6Q9BXI9 259 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 ANKZF1Q9H8Y5 726 aa13.52□□□□□ -0.25
CLSTN3-216ENST00000545663 A0A1W2PR80 420 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 BANF1O75531 89 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 LIMS1P48059 325 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 CHN2P52757 468 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 CHRNEQ04844 493 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 CCNIQ14094 377 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 FASTKD3Q14CZ7 662 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 ACAP2Q15057 778 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 TRIP10Q15642 601 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 SWI5Q1ZZU3 235 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 GLYR1Q49A26 553 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 TIMM23BQ5SRD1 257 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 HP1BP3Q5SSJ5 553 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 TEDDM1Q5T9Z0 273 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 HBMQ6B0K9 141 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 MARCH3Q86UD3 253 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 NKAPQ8N5F7 415 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 NUP43Q8NFH3 380 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 UHMK1Q8TAS1 419 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 OSTF1Q92882 214 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 HPS1Q92902 700 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 UBE2E3Q969T4 207 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 MTBPQ96DY7 904 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 PTGES2Q9H7Z7 377 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 CNOT10Q9H9A5 744 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 KLHL13Q9P2N7 655 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 MGAT4BQ9UQ53 548 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 VDAC3Q9Y277 283 aa13.51□□□□□ -0.25
CLSTN3-216ENST00000545663 TCRBV9S1A1TA0A576 114 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 ERLIN1O75477 346 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 ABHD2P08910 425 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 TACSTD2P09758 323 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 EPHA1P21709 976 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 KRT20P35900 424 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 PNLIPRP2P54317 469 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 ERCC6LQ2NKX8 1250 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 FBLN7Q53RD9 439 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 Q6ZT83 130 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 TDRPQ86YL5 185 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 WDR75Q8IWA0 830 aaKnown RBP13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 ZDHHC22Q8N966 263 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 ZNF540Q8NDQ6 660 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 OR52N5Q8NH56 324 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 RNF128Q8TEB7 428 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 VRK1Q99986 396 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 CENPKQ9BS16 269 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 FUT8Q9BYC5 575 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 PPCSQ9HAB8 311 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 PRODH2Q9UF12 536 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 CES1P1Q9UKY3 287 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 RAB21Q9UL25 225 aa13.5□□□□□ -0.25
CLSTN3-216ENST00000545663 A0A087WUV0 522 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 C9JVG2 144 aa13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 M0R1B8 84 aa13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 NDUFB5O43674 189 aa13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 ERAL1O75616 437 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 PGM3O95394 542 aa13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 STAMBPO95630 424 aa13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 ATP1B1P05026 303 aa13.49□□□□□ -0.25
CLSTN3-216ENST00000545663 GGT1P19440 569 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms