RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PRSS44E7EML9 344 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 SHOXO15266 292 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 HDAC3O15379 428 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 CFLARO15519 480 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PSMG1O95456 288 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 CLDN14O95500 239 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 IL33O95760 270 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 HPNP05981 417 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 GSNP06396 782 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ALOX5P09917 674 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 LAMP1P11279 417 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 GABRA1P14867 456 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ACVR2AP27037 513 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PTPN6P29350 595 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PTGDSP41222 190 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 TRPC1P48995 793 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 CDK9P50750 372 aaKnown RBP6.72□□□□□ -1.33
CPSF7-224ENST00000544990 C21orf58P58505 322 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ADORA2A-AS1P86434 159 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PGS1Q32NB8 556 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 FNDC7Q5VTL7 733 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 BHLHB9Q6PI77 547 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 C3P1Q6ZMU1 363 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PLCZ1Q86YW0 608 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PM20D2Q8IYS1 436 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 VPS37AQ8NEZ2 397 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 OR4N2Q8NGD1 307 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 OR5M9Q8NGP3 310 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 GPR151Q8TDV0 419 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ASB5Q8WWX0 329 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 SLC9A6Q92581 669 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 RND1Q92730 232 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 MOAP1Q96BY2 351 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 EFHD2Q96C19 240 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-224ENST00000544990 NTNG2Q96CW9 530 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 COQ8BQ96D53 544 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ATP6V1G3Q96LB4 118 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 Q96M66 194 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 MS4A4EQ96PG1 132 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 DMRTA2Q96SC8 542 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 DUSP26Q9BV47 211 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 NUF2Q9BZD4 464 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 SLC6A15Q9H2J7 730 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 UBQLN3Q9H347 655 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 VIPAS39Q9H9C1 493 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 MEAF6Q9HAF1 191 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 HHATLQ9HCP6 504 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 GALNT9Q9HCQ5 603 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 CHST11Q9NPF2 352 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PNPLA3Q9NST1 481 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ZCCHC3Q9NUD5 404 aaKnown RBP6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PNPOQ9NVS9 261 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ALKBH4Q9NXW9 302 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 NTMQ9P121 344 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PCDHGB4Q9UN71 923 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 ABCG2Q9UNQ0 655 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 C15orf41Q9Y2V0 281 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PCDHGB3Q9Y5G1 929 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 KLF2Q9Y5W3 355 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-224ENST00000544990 WIF1Q9Y5W5 379 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 SNX8Q9Y5X2 465 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 PCNX1Q96RV3 2341 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 SPTBN1Q01082 2364 aaKnown RBP6.72□□□□□ -1.33
CPSF7-224ENST00000544990 LRRK2Q5S007 2527 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 USP9XQ93008 2570 aaPredicted RBP6.71□□□□□ -1.33
CPSF7-224ENST00000544990 ARHGAP21Q5T5U3 1957 aa6.71□□□□□ -1.33
CPSF7-224ENST00000544990 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 AHRRA9YTQ3 701 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 FAM47E-STBD1D6RA91 191 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 ADAM10O14672 748 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 MSTNO14793 375 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 KLF11O14901 512 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 PRODHO43272 600 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 SNNO75324 88 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-224ENST00000544990 NKX2-2O95096 273 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 C6orf47O95873 294 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 KRT16P08779 473 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 KITP10721 976 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 CYP4B1P13584 511 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 EFNA1P20827 205 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-224ENST00000544990 HTR1EP28566 365 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 LCN1P31025 176 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 EVI2BP34910 448 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 PTGER4P35408 488 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 RFX3P48380 749 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 CCT3P49368 545 aaKnown RBP6.71□□□□□ -1.34
CPSF7-224ENST00000544990 CLNS1AP54105 237 aaKnown RBP6.71□□□□□ -1.34
CPSF7-224ENST00000544990 DIO3P55073 304 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 PMPCAQ10713 525 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 TP53BP2Q13625 1128 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 DPY19L1Q2PZI1 675 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 SPDYE7PQ495Y7 208 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 NHSL2Q5HYW2 709 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 EMC4Q5J8M3 183 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 ANXA8L1Q5VT79 327 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 SP5Q6BEB4 398 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-224ENST00000544990 OGFOD2Q6N063 350 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 MFSD12Q6NUT3 480 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 B3GNT6Q6ZMB0 384 aa6.71□□□□□ -1.34
CPSF7-224ENST00000544990 SPATA19Q7Z5L4 167 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms