RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 DIMT1Q9UNQ2 313 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 HYKKA2RU49 373 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 FRS3O43559 492 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PRKRAO75569 313 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 SCGNO76038 276 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 IL1AP01583 271 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CA3P07451 260 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CD22P20273 847 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 AGTR1P30556 359 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 DNASE1L1P49184 302 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 C21orf58P58505 322 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CSNK1G2P78368 415 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 C3orf38Q5JPI3 329 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 METRNLQ641Q3 311 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 FIGNL1Q6PIW4 674 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ZNF782Q6ZMW2 699 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 SLC7A5P1Q8MH63 180 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SLC44A3Q8N4M1 653 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TSTD1Q8NFU3 115 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ADAMTS18Q8TE60 1221 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CDADC1Q9BWV3 514 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 HDHD5Q9BXW7 423 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 RBCK1Q9BYM8 510 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 BCL2L14Q9BZR8 327 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 DUSP21Q9H596 190 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SLC52A3Q9NQ40 469 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 GRHPRQ9UBQ7 328 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 HCFC2Q9Y5Z7 792 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 LRRN3E7EW58 273 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CSF2P04141 144 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 FOSL1P15407 271 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TYRP1P17643 537 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CXCR1P25024 350 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 RABIFP47224 123 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TSPAN31Q12999 210 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 GBX1Q14549 363 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PGGHGQ32M88 737 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 C12orf40Q86WS4 652 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 VWA5B2Q8N398 1253 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SAMD12Q8N8I0 201 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 OR52I1Q8NGK6 324 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 COQ8AQ8NI60 647 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TRIM43Q96BQ3 446 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 OR5M11Q96RB7 305 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 UQCC2Q9BRT2 126 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ALG8Q9BVK2 526 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TTTY10Q9BZA0 68 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TP63Q9H3D4 680 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 LRRN3Q9H3W5 708 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PCDH10Q9P2E7 1040 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SH2B3Q9UQQ2 575 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ASB4Q9Y574 426 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 NUP205Q92621 2012 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 A0A0J9YY10 115 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 A0A1B0GVC2 190 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 A0A1B0GVI7 797 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 FLRT2O43155 660 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PPP1R3DO95685 299 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 APOC3P02656 99 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 HTR1AP08908 422 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 MAPK3P27361 379 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 AP2S1P53680 142 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 FGL1Q08830 312 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PUS10Q3MIT2 529 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 KIAA1211LQ6NV74 962 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PAQR7Q86WK9 346 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 LYSMD2Q8IV50 215 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ACBD7Q8N6N7 88 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CDRT4Q8N9R6 151 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 OR2L3Q8NG85 312 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 OR5W2Q8NH69 310 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 DYNC2LI1Q8TCX1 351 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 LMX1AQ8TE12 382 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ACOT11Q8WXI4 607 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 HSPA12BQ96MM6 686 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 NEDD4LQ96PU5 975 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 C1QTNF2Q9BXJ5 285 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 IFT46Q9NQC8 304 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PPIEQ9UNP9 301 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 A3GALT2U3KPV4 340 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SBF1O95248 1867 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 HMX3A6NHT5 357 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ZAR1LA6NP61 321 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 UPK1AO00322 258 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 BMP1P13497 986 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 HNRNPA2B1P22626 353 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 TNFSF8P32971 234 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 GAS6Q14393 721 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PRAMEF8Q5VWM4 474 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PRAMEF7Q5VXH5 474 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ZNF227Q86WZ6 799 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 LACC1Q8IV20 430 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SDR16C5Q8N3Y7 309 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 DOK4Q8TEW6 326 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SGTBQ96EQ0 304 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 MRGPRX3Q96LB0 322 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 PPIL3Q9H2H8 161 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms