RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TWSG1Q9GZX9 223 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 RPRD1BQ9NQG5 326 aaKnown RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 SIDT1Q9NXL6 827 aaKnown RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 COMMD3Q9UBI1 195 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 MED31Q9Y3C7 131 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 DAPL1A0PJW8 107 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 BLACEA4D250 179 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 RIIAD1A6NNX1 92 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 WASHC1A8K0Z3 465 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 B4DXG7 233 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 C4orf51C9J302 202 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ARHGEF9O43307 516 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 FCMRO60667 390 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 AZGP1P25311 298 aaKnown RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ADPRHP54922 357 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CTBP2P56545 445 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 MLLT1Q03111 559 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 DUSP2Q05923 314 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 GALEQ14376 348 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TCEA2Q15560 299 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CARTPTQ16568 116 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF750Q32MQ0 723 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TBRG1Q3YBR2 411 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 C6orf132Q5T0Z8 1188 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CNIH2Q6PI25 160 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF836Q6ZNA1 936 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CDH24Q86UP0 819 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CPOQ8IVL8 374 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SFTPA1Q8IWL2 248 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ASCC1Q8N9N2 400 aaKnown RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 OR4C6Q8NH72 309 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SPRYD4Q8WW59 207 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SLC7A6Q92536 515 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 COL26A1Q96A83 441 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 AHCYL2Q96HN2 611 aaKnown RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 OR2A5Q96R48 311 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TM9SF2Q99805 663 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ATF6BQ99941 703 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 QRSL1Q9H0R6 528 aaKnown RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 OR52D1Q9H346 318 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TP63Q9H3D4 680 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TBC1D17Q9HA65 648 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TRPV5Q9NQA5 729 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CMC2Q9NRP2 79 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 HAO2Q9NYQ3 351 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SERGEFQ9UGK8 458 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 GPR55Q9Y2T6 319 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 COL4A3Q01955 1670 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 OR5K4A6NMS3 321 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 PRR23D1E9PI22 279 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 J3QRE1 110 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 RNF13O43567 381 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SLC43A1O75387 559 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 GPR75O95800 540 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 PRR23D2P0DMB1 279 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 GDI1P31150 447 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 WASP42768 502 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 KIR2DL1P43626 348 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 GPR4P46093 362 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 IL18Q14116 193 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 DOC2BQ14184 412 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CDK10Q15131 360 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 EXOSC6Q5RKV6 272 aaKnown RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 DCST2Q5T1A1 773 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 PRPF38BQ5VTL8 546 aaKnown RBP12.14□□□□□ -0.47
CPSF7-223ENST00000544669 HBMQ6B0K9 141 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 FBXO42Q6P3S6 717 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 NIPAL3Q6P499 406 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SPATC1Q76KD6 591 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 COX18Q8N8Q8 333 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TEX19Q8NA77 164 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 KCT2Q8NC54 265 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 FANK1Q8TC84 345 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ST6GAL2Q96JF0 529 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SAMD8Q96LT4 415 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 NRTNQ99748 197 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 ZFYVE21Q9BQ24 234 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TTYH2Q9BSA4 534 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TMEM43Q9BTV4 400 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 SLC35A3Q9Y2D2 325 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 CHST2Q9Y4C5 530 aa12.14□□□□□ -0.47
CPSF7-223ENST00000544669 TCF20Q9UGU0 1960 aaKnown RBP12.13□□□□□ -0.47
CPSF7-223ENST00000544669 TTC36A6NLP5 189 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 C2orf74A8MZ97 194 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF3P17036 446 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 HK1P19367 917 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ATP12AP54707 1039 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 MAP4K2Q12851 820 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF155Q12901 538 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-223ENST00000544669 OR1Q1Q15612 314 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ZNHIT3Q15649 155 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-223ENST00000544669 DUSP5Q16690 384 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 AMZ1Q400G9 498 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 FLYWCH1Q4VC44 716 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms