RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 DCDC2BA2VCK2 349 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 TVP23AA6NH52 213 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 BPNT1O95861 308 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 DRD5P21918 477 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 HOXC13P31276 330 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 PSMB10P40306 273 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 PITPNBP48739 271 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 OR7A5Q15622 319 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 RAB11BQ15907 218 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 HMBOX1Q6NT76 420 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 C3orf33Q6P1S2 294 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 ZNF740Q8NDX6 193 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 UBXN10Q96LJ8 280 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 SLC6A17Q9H1V8 727 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 PRSS16Q9NQE7 514 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 F5H5K5 113 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 SLC2A5P22732 501 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 WNT4P56705 351 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 LRRC69Q6ZNQ3 347 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 SPAG16Q8N0X2 631 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 LILRA3Q8N6C8 439 aaPredicted RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 B3GNT7Q8NFL0 401 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 ADAMTS16Q8TE57 1224 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 TIMM29Q9BSF4 260 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 SYT4Q9H2B2 425 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 AGPAT4Q9NRZ5 378 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 UBE2NP61088 152 aaKnown RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 EIF2B1Q14232 305 aaKnown RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 SLC15A4Q8N697 577 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.488e-7■□□□□ 9.6
CHD4-211ENST00000544484 GMEB1Q9Y692 573 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 AKR1C4P17516 323 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 IMPA1P29218 277 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 FOLR3P41439 243 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 FOXK1P85037 733 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 AWAT2Q6E213 333 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 VRK3Q8IV63 474 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 SYNPOQ8N3V7 929 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 IL17RCQ8NAC3 791 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 SPRYD4Q8WW59 207 aaPredicted RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 FAM46BQ96A09 425 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 BPIFA2Q96DR5 249 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 CACNG6Q9BXT2 260 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 HSFX1Q9UBD0 423 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 TRAV18A0A075B6X5 111 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 SYT7O43581 403 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 CSNK1EP49674 416 aaKnown RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 PRPS1P60891 318 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 LSM14AQ8ND56 463 aaKnown RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 MFSD8Q8NHS3 518 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 PDLIM5Q96HC4 596 aaKnown RBP12.04□□□□□ -0.48
CHD4-211ENST00000544484 SAP130Q9H0E3 1048 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 OR51E2Q9H255 320 aa12.04□□□□□ -0.48
CHD4-211ENST00000544484 H0YGG7 62 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 OR7A17O14581 309 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 AHRP35869 848 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 UGT2B10P36537 528 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 ARF3P61204 181 aaPredicted RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 SLC14A2Q15849 920 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 LSMEM2Q8N112 164 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 OR5K2Q8NHB8 316 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 ACOT13Q9NPJ3 140 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 KLHL42Q9P2K6 505 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 PCDHGA8Q9Y5G5 932 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 ARSJQ5FYB0 599 aaPredicted RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 PODNL1Q6PEZ8 512 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 DDX31Q9H8H2 851 aaKnown RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 LCATP04180 440 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 LSSP48449 732 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 NKX3-2P78367 333 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 TRMT10AQ8TBZ6 339 aaKnown RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 ZFAND2BQ8WV99 257 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 ZBP1Q9H171 429 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 KLHL9Q9P2J3 617 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 ICKQ9UPZ9 632 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 A0A1B0GVC2 190 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 TCRBV5S1A1TA0A578 114 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 F5H0A9 414 aaPredicted RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 ACOT7O00154 380 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 FBP2O00757 339 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 CASC3O15234 703 aaKnown RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 PRKYO43930 277 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 DNASE1P24855 282 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 PTH2RP49190 550 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 RSU1Q15404 277 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 PRRC1Q96M27 445 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 CCNL2Q96S94 520 aaPredicted RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 QRSL1Q9H0R6 528 aaKnown RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 SLC25A18Q9H1K4 315 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 BRINP1O60477 761 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 AIFM1O95831 613 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 IRS1P35568 1242 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 RNASE10Q5GAN6 216 aaKnown RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 ENTPD8Q5MY95 495 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 RETREG3Q86VR2 466 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 OR2T11Q8NH01 316 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms