RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 PTGES2Q9H7Z7 377 aa9.66□□□□□ -0.86
CHEK1-218ENST00000544373 DNAJB12Q9NXW2 375 aaKnown RBP9.66□□□□□ -0.86
CHEK1-218ENST00000544373 VDAC3Q9Y277 283 aa9.66□□□□□ -0.86
CHEK1-218ENST00000544373 ACANP16112 2415 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 FAM221AA4D161 298 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 H3BML4 177 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 OPN1LWP04000 364 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 SERPINE1P05121 402 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 ALOX5P09917 674 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 DHRS4L1P0CG22 281 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 PEPDP12955 493 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 TBXA2RP21731 343 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 BGNP21810 368 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 DNAJA1P31689 397 aaKnown RBP9.65□□□□□ -0.86
CHEK1-218ENST00000544373 CCT3P49368 545 aaKnown RBP9.65□□□□□ -0.86
CHEK1-218ENST00000544373 ABCE1P61221 599 aaKnown RBP9.65□□□□□ -0.86
CHEK1-218ENST00000544373 CD226Q15762 336 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHEK1-218ENST00000544373 TMEM44Q2T9K0 475 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 CLEC4FQ8N1N0 589 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 COX18Q8N8Q8 333 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 PSMA8Q8TAA3 256 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 OR5P2Q8WZ92 322 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 CDS1Q92903 461 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 SH3YL1Q96HL8 342 aaPredicted RBP9.65□□□□□ -0.86
CHEK1-218ENST00000544373 SFXN3Q9BWM7 321 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 AKTIPQ9H8T0 292 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 RASSF1Q9NS23 344 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 GPATCH2Q9NW75 528 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 ARHGAP21Q5T5U3 1957 aa9.65□□□□□ -0.86
CHEK1-218ENST00000544373 DOCK7Q96N67 2140 aa9.65□□□□□ -0.87
CHEK1-218ENST00000544373 MPDZO75970 2070 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 NPIPA5A0A0B4J1W7 369 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 A0A1W2PNV4 684 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 TUBAL3A6NHL2 446 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 SLC22A20A6NK97 555 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 A6NNC1 897 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 ESPNB1AK53 854 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 NPIPA7E9PJI5 369 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 BIRC5O15392 142 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 NDUFB5O43674 189 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 NGFRP08138 427 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 NPIPA8P0DM63 369 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PRPS1L1P21108 318 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 HBA1P69905 142 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 EMX2Q04743 252 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 TP53BP2Q13625 1128 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 GANABQ14697 944 aaKnown RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 ZCCHC12Q6PEW1 402 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 GGNQ86UU5 652 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 MEIOBQ8N635 442 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 OR5AK3PQ8NH89 298 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 FNDC9Q8TBE3 224 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 FAM222BQ8WU58 562 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 SMPDL3BQ92485 455 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 STARD4Q96DR4 205 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 CHMP6Q96FZ7 201 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PIGQQ9BRB3 760 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 RBM24Q9BX46 236 aaKnown RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 BTBD2Q9BX70 525 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PINK1Q9BXM7 581 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 POLDIP3Q9BY77 421 aaKnown RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 CLEC4MQ9H2X3 399 aaPredicted RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 SSU72Q9NP77 194 aaKnown RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 GIN1Q9NXP7 522 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 GALNT8Q9NY28 637 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 FOXD3Q9UJU5 478 aaPredicted RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PCNX3Q9H6A9 2034 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 OIP5O43482 229 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 RPL3P39023 403 aaKnown RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 SLC1A6P48664 564 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PRIM2P49643 509 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 CLDN8P56748 225 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 RPS26P62854 115 aaKnown RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 POU6F2P78424 691 aaPredicted RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PGS1Q32NB8 556 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 SPDYE7PQ495Y7 208 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 GLYR1Q49A26 553 aaPredicted RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 VWA1Q6PCB0 445 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 CHMP1BQ7LBR1 199 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 CLECL1Q8IZS7 167 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 CNEP1R1Q8N9A8 125 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 DTNBP1Q96EV8 351 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 LRRC46Q96FV0 321 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 ZFP3Q96NJ6 502 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 DUSP26Q9BV47 211 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 ACTRT3Q9BYD9 372 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PIGUQ9H490 435 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 SERHL2Q9H4I8 314 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 KCNK9Q9NPC2 374 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 UBQLN4Q9NRR5 601 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 DUSP22Q9NRW4 184 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PNPOQ9NVS9 261 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 EIF3LQ9Y262 564 aaKnown RBP9.64□□□□□ -0.87
CHEK1-218ENST00000544373 RAP2CQ9Y3L5 183 aa9.64□□□□□ -0.87
CHEK1-218ENST00000544373 PRRC2AP48634 2157 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms