RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ZNF436Q9C0F3 470 aaPredicted RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 MVB12BQ9H7P6 319 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 MTHFD2LQ9H903 347 aaPredicted RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 STK17BO94768 372 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 OPN1LWP04000 364 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SLX4IPQ5VYV7 408 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 APCDD1Q8J025 514 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SPTSSAQ969W0 71 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 MED16Q9Y2X0 877 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 PRAMEF8Q5VWM4 474 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 PRAMEF7Q5VXH5 474 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 ZFP82Q8N141 532 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 SORBS1Q9BX66 1292 aaKnown RBP14.59□□□□□ -0.07
CHD4-210ENST00000544040 TCEAL2Q9H3H9 227 aaPredicted RBP14.59□□□□□ -0.07
CHD4-210ENST00000544040 ACTL7AQ9Y615 435 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 MED6O75586 246 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 HOXC5Q00444 222 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 HIST2H3PS2Q5TEC6 136 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 TMPRSS7Q7RTY8 843 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 C22orf15Q8WYQ4 148 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 RIPPLY1Q0D2K3 151 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 MCATQ8IVS2 390 aaKnown RBP14.59□□□□□ -0.07
CHD4-210ENST00000544040 C3orf49Q96BT1 292 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 RANBP9Q96S59 729 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 STARD5Q9NSY2 213 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 ENPP4Q9Y6X5 453 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 MEIOCA2RUB1 952 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 HOXB5P09067 269 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 HSD17B1P14061 328 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 CRHBPP24387 322 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 STEAP2Q8NFT2 490 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 RSC1A1Q92681 617 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 CDH20Q9HBT6 801 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 NOX3Q9HBY0 568 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 IGSF5Q9NSI5 407 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 NID2Q14112 1375 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 GSRP00390 522 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 TAS2R31P59538 309 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 DNAJC5GQ8N7S2 189 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 OR7G1Q8NGA0 311 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 FUBP1Q96AE4 644 aaKnown RBP14.59□□□□□ -0.07
CHD4-210ENST00000544040 TRMT2BQ96GJ1 504 aaKnown RBP14.59□□□□□ -0.07
CHD4-210ENST00000544040 SLC29A1Q99808 456 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 MAF1Q9H063 256 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 VDAC3Q9Y277 283 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 KIAA1210Q9ULL0 1709 aa14.59□□□□□ -0.07
CHD4-210ENST00000544040 PIRO00625 290 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 SYPP08247 313 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 MC3RP41968 323 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 PEA15Q15121 130 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 UPP1Q16831 310 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 ZNF808Q8N4W9 903 aaPredicted RBP14.58□□□□□ -0.07
CHD4-210ENST00000544040 GTF2H4Q92759 462 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 ZBTB8AQ96BR9 441 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 C4orf36Q96KX1 117 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 BCL7BQ9BQE9 202 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 PLEKHM1Q9Y4G2 1056 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 A0A1W2PS29 197 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 H0Y8G0 127 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 FBXO24O75426 580 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 RAB5CP51148 216 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 TMEM130Q8N3G9 435 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 DTWD1Q8N5C7 304 aa14.58□□□□□ -0.07
CHD4-210ENST00000544040 APOBEC3BQ9UH17 382 aaKnown RBP14.58□□□□□ -0.07
CHD4-210ENST00000544040 ADGRB2O60241 1585 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 PRAMEF2O60811 474 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 AK1P00568 194 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 SOD2P04179 222 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 BMP2P12643 396 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 BPIP17213 487 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 HRH2P25021 359 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 FOXA1P55317 472 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 GALEQ14376 348 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 SFRP5Q5T4F7 317 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 MRPL21Q7Z2W9 205 aaKnown RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 C12orf76Q8N812 135 aaPredicted RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 OR1J4Q8NGS1 313 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 ANKRD60Q9BZ19 345 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 IL37Q9NZH6 218 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 NME7Q9Y5B8 376 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 FANCGO15287 622 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 SERPINA2P20848 420 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 ACSM3Q53FZ2 586 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 LETMD1Q6P1Q0 360 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 BSCL2Q96G97 398 aaPredicted RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 SLC30A3Q99726 388 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 DDX31Q9H8H2 851 aaKnown RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 RIMS3Q9UJD0 308 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 LOC285095A0A1B0GVY8 99 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 ZNF888P0CJ79 500 aaPredicted RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 SLC14A1Q13336 389 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 FIGLAQ6QHK4 219 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 ZFP57Q9NU63 452 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 PLIN4Q96Q06 1357 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 MGST1P10620 155 aaKnown RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 ENDOUP21128 410 aaKnown RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 RPL23AP62750 156 aaKnown RBP14.58□□□□□ -0.08
CHD4-210ENST00000544040 HNF4GQ14541 408 aa14.58□□□□□ -0.08
CHD4-210ENST00000544040 PROX2Q3B8N5 592 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms