RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 POLE3Q9NRF9 147 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 QPCTLQ9NXS2 382 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 LIPT1Q9Y234 373 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 ARL2BPQ9Y2Y0 163 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 WDR45Q9Y484 360 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 A0A1B0GTH9 108 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 FXYD1O00168 92 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 NDUFB5O43674 189 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 TNFRSF21O75509 655 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 UGT2B17O75795 530 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 CBR3O75828 277 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 HPNP05981 417 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 BCHEP06276 602 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 GUSBP08236 651 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 TFPTP0C1Z6 253 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 NR2F1P10589 423 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 BMP2P12643 396 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 COX4I1P13073 169 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 HPGDP15428 266 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 MTPNP58546 118 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 CHRNEQ04844 493 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 FADDQ13158 208 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 SLC10A1Q14973 349 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 ZNF141Q15928 474 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 MAPK14Q16539 360 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 TRMT5Q32P41 509 aaKnown RBP13.74□□□□□ -0.21
CD9-210ENST00000543916 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 PDZK1Q5T2W1 519 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 AP1ARQ63HQ0 302 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 TRILQ7L0X0 811 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 HMGN2P46Q86SG4 172 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 ZNF614Q8N883 585 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 ZNF527Q8NB42 609 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 OR2M3Q8NG83 312 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 RCN3Q96D15 328 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 SLC39A3Q9BRY0 314 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 HOXD1Q9GZZ0 328 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 DSN1Q9H410 356 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 SDHAF3Q9NRP4 125 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 MED11Q9P086 117 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 P2RX2Q9UBL9 471 aa13.74□□□□□ -0.21
CD9-210ENST00000543916 PCNX3Q9H6A9 2034 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 IGLV3-32A0A0A0MS00 114 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 OIP5O43482 229 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 GMFGO60234 142 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 TRAPPC6AO75865 159 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 GPX2P18283 190 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 ENDOUP21128 410 aaKnown RBP13.73□□□□□ -0.21
CD9-210ENST00000543916 HPCAP84074 193 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 C17orf67Q0P5P2 114 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 ELOAQ14241 798 aaKnown RBP13.73□□□□□ -0.21
CD9-210ENST00000543916 TOMM20Q15388 145 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 EIF2S3LQ2VIR3 472 aaKnown RBP13.73□□□□□ -0.21
CD9-210ENST00000543916 EIPR1Q53HC9 387 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 LRRC74BQ6ZQY2 392 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 ZNF619Q8N2I2 560 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 FAM83FQ8NEG4 500 aaPredicted RBP13.73□□□□□ -0.21
CD9-210ENST00000543916 OR4K17Q8NGC6 315 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 RP9Q8TA86 221 aaKnown RBP13.73□□□□□ -0.21
CD9-210ENST00000543916 SLC38A5Q8WUX1 472 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 MAL2Q969L2 176 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 ZG16BQ96DA0 208 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 TMEM19Q96HH6 336 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 KLHDC3Q9BQ90 382 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 QRSL1Q9H0R6 528 aaKnown RBP13.73□□□□□ -0.21
CD9-210ENST00000543916 ACKR4Q9NPB9 350 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 A4GALTQ9NPC4 353 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 THUMPD1Q9NXG2 353 aaKnown RBP13.73□□□□□ -0.21
CD9-210ENST00000543916 DTNAQ9Y4J8 743 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 FREM3P0C091 2139 aa13.73□□□□□ -0.21
CD9-210ENST00000543916 DSPPQ9NZW4 1301 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 TRGV5A0A0B4J1U4 118 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 A0A1B0GVC2 190 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 EVPLLA8MZ36 301 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 WISP1O95388 367 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 ZNF117Q03924 483 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 NDUFAF6Q330K2 333 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 RPS26P11Q5JNZ5 115 aaPredicted RBP13.72□□□□□ -0.21
CD9-210ENST00000543916 WIPI1Q5MNZ9 446 aaPredicted RBP13.72□□□□□ -0.21
CD9-210ENST00000543916 YRDCQ86U90 279 aaKnown RBP13.72□□□□□ -0.21
CD9-210ENST00000543916 ANKS4BQ8N8V4 417 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 NEIL3Q8TAT5 605 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 PHOSPHO1Q8TCT1 267 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 SH3YL1Q96HL8 342 aaPredicted RBP13.72□□□□□ -0.21
CD9-210ENST00000543916 OR2B2Q9GZK3 357 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 LDAHQ9H6V9 325 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 SPRR3Q9UBC9 169 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 TNFRSF10DQ9UBN6 386 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 CORO2BQ9UQ03 480 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 OSGIN2Q9Y236 505 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 ZNF835Q9Y2P0 537 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
CD9-210ENST00000543916 GCN1Q92616 2671 aaKnown RBP13.72□□□□□ -0.21
CD9-210ENST00000543916 SERINC4A6NH21 518 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 SUSD5O60279 629 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 HCN1O60741 890 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 SLC19A2O60779 497 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 NPPAP01160 153 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 ARAFP10398 606 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms