RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SMIM12Q96EX1 92 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 BTN2A3PQ96KV6 586 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 RDH12Q96NR8 316 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 CSF3RQ99062 836 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 FUZQ9BT04 418 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 GSX2Q9BZM3 304 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 IL1RL2Q9HB29 575 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MYNNQ9NPC7 610 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 SEC14L3Q9UDX4 400 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 SLC13A4Q9UKG4 626 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 SLC6A5Q9Y345 797 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 ADAM18Q9Y3Q7 739 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MAGEB6P1A0A0J9YX57 407 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 OR6C68A6NDL8 312 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 AGAP5A6NIR3 686 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 OGG1O15527 345 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 CHST10O43529 356 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 LIASO43766 372 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 PRKYO43930 277 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 RFPL3O75679 317 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SOX30O94993 753 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 F13BP05160 661 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ASPAP45381 313 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 RAB5CP51148 216 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 YPEL5P62699 121 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 MS4A2Q01362 244 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SEMG2Q02383 582 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 EVX2Q03828 476 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 PTCHD3Q3KNS1 767 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF528Q3MIS6 628 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 CBWD6Q4V339 395 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 CBWD3Q5JTY5 395 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 CBWD5Q5RIA9 395 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 C16orf46Q6P387 395 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 KCNIP4Q6PIL6 250 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 DPY19L2P2Q6ZN68 376 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 PIGZQ86VD9 579 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 KDM8Q8N371 416 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF610Q8N9Z0 462 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 HAS1Q92839 578 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SEPT5Q99719 369 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SLC35A5Q9BS91 424 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ALG8Q9BVK2 526 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SPAG4Q9NPE6 437 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 KLHL8Q9P2G9 620 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 CLEC4EQ9ULY5 219 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 FLVCR2Q9UPI3 526 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 GRM6O15303 877 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 TGFB1I1O43294 461 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF264O43296 627 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SPRY1O43609 319 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 NCK1P16333 377 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 TGM2P21980 687 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ARL4AP40617 200 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 PSMD8P48556 350 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ADARB1P78563 741 aaKnown RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 E2F1Q01094 437 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 XKR6Q5GH73 641 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 CHST9Q7L1S5 443 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 AMIGO3Q86WK7 504 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF655Q8N720 491 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 OR14K1Q8NGZ2 314 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 WDR20Q8TBZ3 569 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 GPBAR1Q8TDU6 330 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 TBCKQ8TEA7 893 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 NAA11Q9BSU3 229 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 KATNB1Q9BVA0 655 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 TASP1Q9H6P5 420 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 IQCMA0A1B0GVH7 501 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 TCAF2A6NFQ2 919 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 CLIC2O15247 247 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SCGNO76038 276 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SCELO95171 688 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 ALDOCP09972 364 aaKnown RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 DAOP14920 347 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 C21orf33P30042 268 aaPredicted RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 KLF10Q13118 480 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 MAB21L1Q13394 359 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 GNMTQ14749 295 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 LANCL3Q6ZV70 420 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 NRARPQ7Z6K4 114 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SKA3Q8IX90 412 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 NPAS3Q8IXF0 933 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 FAM222BQ8WU58 562 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 SLC29A3Q9BZD2 475 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 DMAC2Q9NW81 257 aa8.35□□□□□ -1.07
VPS13D-212ENST00000543766 YBX2Q9Y2T7 364 aaKnown RBP8.35□□□□□ -1.07
VPS13D-212ENST00000543766 INSRRP14616 1297 aa8.34□□□□□ -1.07
VPS13D-212ENST00000543766 TSPAN8P19075 237 aa8.34□□□□□ -1.07
VPS13D-212ENST00000543766 TM4SF1P30408 202 aa8.34□□□□□ -1.07
VPS13D-212ENST00000543766 GRK5P34947 590 aa8.34□□□□□ -1.07
VPS13D-212ENST00000543766 IDH2P48735 452 aaKnown RBP8.34□□□□□ -1.07
VPS13D-212ENST00000543766 CHRNB3Q05901 458 aa8.34□□□□□ -1.07
VPS13D-212ENST00000543766 ELAVL2Q12926 359 aaKnown RBP8.34□□□□□ -1.07
VPS13D-212ENST00000543766 NKAIN1Q4KMZ8 207 aa8.34□□□□□ -1.07
VPS13D-212ENST00000543766 PID1Q7Z2X4 250 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms