RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 T-ENOLP0DO92 83 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 PCGF2P35227 344 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 PTGDSP41222 190 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 CPA2P48052 419 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 MEOX1P50221 254 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 GZMMP51124 257 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 SLC7A2P52569 658 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 GAS1P54826 345 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 CHRNEQ04844 493 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 FOXO1Q12778 655 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 SCARB2Q14108 478 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 SELPLGQ14242 412 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 LARS2Q15031 903 aaKnown RBP11.14□□□□□ -0.63
DDX55-210ENST00000543016 GPR68Q15743 365 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 VMACQ2NL98 169 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 SAMD4BQ5PRF9 694 aaKnown RBP11.14□□□□□ -0.63
DDX55-210ENST00000543016 PRAMEF20Q5VT98 475 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 FAM180AQ6UWF9 173 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 C6orf89Q6UWU4 347 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.14□□□□□ -0.63
DDX55-210ENST00000543016 ZAR1Q86SH2 424 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 PATL1Q86TB9 770 aaKnown RBP11.14□□□□□ -0.63
DDX55-210ENST00000543016 SLC22A16Q86VW1 577 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 Q8NA96 180 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 TOR1AIP2Q8NFQ8 470 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 OR2T12Q8NG77 320 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 OR1J4Q8NGS1 313 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 SLC35B4Q969S0 331 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 ZNF583Q96ND8 569 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 EVA1AQ9H8M9 152 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 PROK2Q9HC23 129 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 AGPAT4Q9NRZ5 378 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 FBXO34Q9NWN3 711 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 CMTM6Q9NX76 183 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 TMEM181Q9P2C4 612 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 MKLN1Q9UL63 735 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 LOC400499M0QZD8 3231 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 CFAP47Q6ZTR5 3102 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 PRORSD1PA6NEY8 169 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 SERINC4A6NH21 518 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 EIF4E1BA6NMX2 242 aaKnown RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 EBAG9O00559 213 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 EIF4E2O60573 245 aaKnown RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 GLSO94925 669 aaPredicted RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 UBOX5O94941 541 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 ANGPTL1O95841 491 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 IFNA14P01570 189 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 IL7RP16871 459 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 RPS4Y1P22090 263 aaKnown RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 ST13P50502 369 aaKnown RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 SUMO3P55854 103 aaPredicted RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 PLGLB1Q02325 96 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 LIPEQ05469 1076 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 NFATC3Q12968 1075 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 BNIP1Q12981 228 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 MAPK11Q15759 364 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 LIN52Q52LA3 116 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 CCDC80Q76M96 950 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 EIF3MQ7L2H7 374 aaKnown RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 PTOV1Q86YD1 416 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 PLCZ1Q86YW0 608 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 ZZZ3Q8IYH5 903 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 NFKBIDQ8NI38 313 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 RASSF5Q8WWW0 418 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 MAL2Q969L2 176 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 HES7Q9BYE0 225 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 ALG2Q9H553 416 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 PTGES2Q9H7Z7 377 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 DEPPQ9NTK1 212 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 TUBA8Q9NY65 449 aaPredicted RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 PPP4R1LQ9P1A2 415 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 PRPF19Q9UMS4 504 aaKnown RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 MRPS18CQ9Y3D5 142 aaKnown RBP11.13□□□□□ -0.63
DDX55-210ENST00000543016 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
DDX55-210ENST00000543016 EXPH5Q8NEV8 1989 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 ELOVL7A1L3X0 281 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 TTLL8A6PVC2 850 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 GTPBP1O00178 669 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 NME4O00746 187 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 SCO2O43819 266 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 GMNNO75496 209 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 ZIC2O95409 532 aaPredicted RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 HSD17B1P14061 328 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 NID1P14543 1247 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 ZNF24P17028 368 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 PRKAR1BP31321 381 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 CPOXP36551 454 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 DNASE1L1P49184 302 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 PCBP3P57721 371 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 GPR85P60893 370 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 KCNJ10P78508 379 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 SLC25A3Q00325 362 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 ALDH6A1Q02252 535 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 ELOAQ14241 798 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 FGFBP1Q14512 234 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 GANABQ14697 944 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 DNAL1Q4LDG9 190 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 KRTCAP3Q53RY4 240 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 PDZK1Q5T2W1 519 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 RNF220Q5VTB9 566 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms