RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	OR5W2	Q8NH69	310 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	KCTD12	Q96CX2	325 aa	Known RBP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	CLIP3	Q96DZ5	547 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	ABHD1	Q96SE0	405 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	UBQLN3	Q9H347	655 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	XKR8	Q9H6D3	395 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	NLGN3	Q9NZ94	848 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	CALML5	Q9NZT1	146 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	IGKV1-8	A0A0C4DH67	115 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	FCMR	O60667	390 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	NFATC1	O95644	943 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	AIFM1	O95831	613 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	CISD3	P0C7P0	127 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	ANXA3	P12429	323 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	DDX6	P26196	483 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	STXBP1	P61764	594 aa	Known RBP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	DBP	Q10586	325 aa	Predicted RBP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	FNDC3B	Q53EP0	1204 aa	Known RBP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	RNASE12	Q5GAN4	147 aa	Known RBP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	METRNL	Q641Q3	311 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	C12orf40	Q86WS4	652 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	ZNF680	Q8NEM1	530 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	OR9A2	Q8NGT5	310 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	TRMT10A	Q8TBZ6	339 aa	Known RBP	12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	CXorf40A	Q8TE69	158 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	OR8D1	Q8WZ84	308 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	FERD3L	Q96RJ6	166 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	TRIM36	Q9NQ86	728 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	SLCO1C1	Q9NYB5	712 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	SLC7A7	Q9UM01	511 aa		12.06	□□□□□ -0.48
DDX11-223	ENST00000542838	TEX13C	A0A0J9YWL9	993 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	SLC35G4	P0C7Q5	338 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TBXA2R	P21731	343 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	HIST1H1T	P22492	207 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	F8A1	P23610	371 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	BCL6	P41182	706 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	PDX1	P52945	283 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	DHCR24	Q15392	516 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TMEM35A	Q53FP2	167 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	KLHL12	Q53G59	568 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	PYHIN1	Q6K0P9	492 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	LYPD4	Q6UWN0	246 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	MEPCE	Q7L2J0	689 aa	Known RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	LUZP2	Q86TE4	346 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	ACOT4	Q8N9L9	421 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	OR10H4	Q8NGA5	316 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	OR11H4	Q8NGC9	324 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	HSD17B8	Q92506	261 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	KAT2A	Q92830	837 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	OR51J1	Q9H342	316 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	NARFL	Q9H6Q4	476 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	KLHL1	Q9NR64	748 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	GLTP	Q9NZD2	209 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	NUBP2	Q9Y5Y2	271 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	LINC00862	A6NCI5	91 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	FZD7	O75084	574 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	REM1	O75628	298 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	SOX30	O94993	753 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TCRB	P04435	133 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	PCCB	P05166	539 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	RHO	P08100	348 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	PRKAR1B	P31321	381 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	MPI	P34949	423 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	PPM1A	P35813	382 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	PRDX1	Q06830	199 aa	Known RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	SLC3A1	Q07837	685 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	MESP2	Q0VG99	397 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TCEAL5	Q5H9L2	206 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	NIPAL3	Q6P499	406 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	CEACAM19	Q7Z692	300 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	ARMC5	Q96C12	935 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	COX14	Q96I36	57 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	ZSWIM3	Q96MP5	696 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TIMP4	Q99727	224 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	LGR4	Q9BXB1	951 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	CLEC4A	Q9UMR7	237 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	LOC105369274	A0A096LPK9	316 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	SLC9B1P1	A6NJY1	282 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	OR5F1	O95221	314 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	ZIC2	O95409	532 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	RAF1	P04049	648 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	HOXB3	P14651	431 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	M6PR	P20645	277 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	VASP	P50552	380 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	CD276	Q5ZPR3	534 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	ERN2	Q76MJ5	926 aa	Known RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	OR4N4	Q8N0Y3	316 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TOMM5	Q8N4H5	51 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	RAB42	Q8N4Z0	105 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TMIE	Q8NEW7	156 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	TTL	Q8NG68	377 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	ADAMTS15	Q8TE58	950 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	GANC	Q8TET4	914 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	NXPE3	Q969Y0	559 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	DACT3	Q96B18	629 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	MS4A6E	Q96DS6	147 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	ELP4	Q96EB1	424 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	DPH1	Q9BZG8	443 aa		12.05	□□□□□ -0.48
DDX11-223	ENST00000542838	OR52D1	Q9H346	318 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms