RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 NQO2P16083 231 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TYMPP19971 482 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TBPP20226 339 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 RAB5AP20339 215 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PTPN3P26045 913 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 SSTR2P30874 369 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 IFNGR2P38484 337 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ELK3P41970 407 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CTSOP43234 321 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CHRNA4P43681 627 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 FMO5P49326 533 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 EVX1P49640 407 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TAF6P49848 677 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TNFSF10P50591 281 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 AFF3P51826 1226 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 OAZ1P54368 228 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 EMP2P54851 167 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CTBP2P56545 445 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 RGS8P57771 180 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 OR10A3P58181 314 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 DNAJB13P59910 316 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 SEC61A1P61619 476 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 DCAF7P61962 342 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 LSM6P62312 80 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TRA2BP62995 288 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 MC1RQ01726 317 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 EGR3Q06889 387 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ITKQ08881 620 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 SLC10A7Q0GE19 358 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TMEM115Q12893 351 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 VEZF1Q14119 521 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 IRF3Q14653 427 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TAF9Q16594 264 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 DECR1Q16698 335 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 VMACQ2NL98 169 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 AGKQ53H12 422 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PLA1AQ53H76 456 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ARSJQ5FYB0 599 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 COL5A1-AS1Q5SY13 56 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 FNBP1LQ5T0N5 605 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 KIAA0319Q5VV43 1072 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PRAMEF8Q5VWM4 474 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PRAMEF7Q5VXH5 474 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 LIPMQ5VYY2 423 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CXorf57Q6NSI4 855 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 GPAT2Q6NUI2 795 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 DNAJC24Q6P3W2 148 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 METTL7BQ6UX53 244 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 FAM151BQ6UXP7 276 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ZCCHC23Q6ZST2 131 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 AHSA2Q719I0 299 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TMUB2Q71RG4 321 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 SLC35D2Q76EJ3 337 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 FAM220AQ7Z4H9 259 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 WDR53Q7Z5U6 358 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 THOC6Q86W42 341 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CBWD2Q8IUF1 395 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 GPC2Q8N158 579 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PELI3Q8N2H9 469 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ZBTB2Q8N680 514 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 LRRC52Q8N7C0 313 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 FAM71CQ8NEG0 241 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TMEM185AQ8NFB2 350 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 OR11H7Q8NGC8 314 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 OR5B17Q8NGF7 314 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 OR1J4Q8NGS1 313 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 OR13C8Q8NGS7 320 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CYP2W1Q8TAV3 490 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ACTL9Q8TC94 416 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CSGALNACT1Q8TDX6 532 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 SMAP2Q8WU79 429 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 LRRN4Q8WUT4 740 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 NT5C3BQ969T7 300 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ZBTB8AQ96BR9 441 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 UPRTQ96BW1 309 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ELMOD3Q96FG2 381 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ZNF479Q96JC4 524 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 DCAF5Q96JK2 942 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ADGRG7Q96K78 797 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 NECTIN4Q96NY8 510 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 OR2M4Q96R27 311 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TAAR6Q96RI8 345 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 MBOAT4Q96T53 435 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 INSM2Q96T92 566 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PCYT2Q99447 389 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 STACQ99469 402 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CNPPD1Q9BV87 410 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 LGR4Q9BXB1 951 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 AMNQ9BXJ7 453 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CDCA4Q9BXL8 241 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ANGPTL4Q9BY76 406 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 SIK2Q9H0K1 926 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 POLR3FQ9H1D9 316 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 HIPK2Q9H2X6 1198 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ZNF408Q9H9D4 720 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 MSL2Q9HCI7 577 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ACP6Q9NPH0 428 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 SLAMF7Q9NQ25 335 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CHRAC1Q9NRG0 131 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms