RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 EIF2S2P20042 333 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 TRIM23P36406 574 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 MTIF2P46199 727 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 ZFP36L2P47974 494 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 SGSHP51688 502 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 FKBP1AP62942 108 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 MRPS6P82932 125 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 SLC17A1Q14916 467 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 EMC2Q15006 297 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 FAM189A2Q15884 450 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 ATF7IP2Q5U623 682 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 AGAP7PQ5VUJ5 663 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 DMKNQ6E0U4 476 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 C16orf62Q7Z3J2 963 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 GPR142Q7Z601 462 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 TSEN54Q7Z6J9 526 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 ERO1BQ86YB8 467 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 GRAMD2AQ8IUY3 354 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 UBQLNLQ8IYU4 475 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 ZCCHC7Q8N3Z6 543 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 DCLK2Q8N568 766 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 STEAP2Q8NFT2 490 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 AZIN2Q96A70 460 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 DHTKD1Q96HY7 919 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 USP28Q96RU2 1077 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 CRNKL1Q9BZJ0 848 aaKnown RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 SUDS3Q9H7L9 328 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 VPS37BQ9H9H4 285 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.59□□□□□ -1.83
SNHG1-217ENST00000541578 CLEC4AQ9UMR7 237 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 AP4B1Q9Y6B7 739 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 MAD1L1Q9Y6D9 718 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 RTL9Q8NET4 1388 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 ABCC12Q96J65 1359 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 BRCA2P51587 3418 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 MYH3P11055 1940 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NPIPA5A0A0B4J1W7 369 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 SRRM4A7MD48 611 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NPIPA2E9PIF3 369 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NPIPA5E9PKD4 350 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 ALOX15BO15296 676 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 BCAS1O75363 584 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NADKO95544 446 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 GOT2P00505 430 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 HPRP00739 348 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 FHP07954 510 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 CCDC172P0C7W6 258 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 ERVK-10P10266 1014 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 PRKACGP22612 351 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 PRKAR2BP31323 418 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 RFC2P35250 354 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 MMP12P39900 470 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 RGS4P49798 205 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 CSNK2BP67870 215 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 CYCSP99999 105 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NCBP1Q09161 790 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 PJVKQ0ZLH3 352 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 ENPP2Q13822 863 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 DDX39BQ13838 428 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 EIF2B1Q14232 305 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 FASTKQ14296 549 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 MAPK6Q16659 721 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 ZSWIM7Q19AV6 140 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 KCTD21Q4G0X4 260 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 HSP90B2PQ58FF3 399 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 BSPRYQ5W0U4 402 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 TMEM225Q6GV28 225 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 FBXL22Q6P050 247 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 Q6ZSR9 355 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 TAS2R42Q7RTR8 314 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 DPY19L4Q7Z388 723 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NANOGNBQ7Z5D8 188 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NET1Q7Z628 596 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 LHFPL4Q7Z7J7 247 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 OR4N5Q8IXE1 308 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF679Q8IYX0 411 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 OR13C2Q8NGS9 318 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 CNDP1Q96KN2 507 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 ALKBH3Q96Q83 286 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 TNFRSF13CQ96RJ3 184 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 CCDC94Q9BW85 323 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 FNDC4Q9H6D8 234 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 ALG9Q9H6U8 611 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 MED20Q9H944 212 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 SCRT2Q9NQ03 307 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 AGPAT5Q9NUQ2 364 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 NMRK1Q9NWW6 199 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 HYPKQ9NX55 129 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 DUS2Q9NX74 493 aaKnown RBP3.58□□□□□ -1.84
SNHG1-217ENST00000541578 GPR83Q9NYM4 423 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 TAS2R16Q9NYV7 291 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 CHRNA9Q9UGM1 479 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 B9D1Q9UPM9 204 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 WDR45Q9Y484 360 aa3.58□□□□□ -1.84
SNHG1-217ENST00000541578 DNAH12Q6ZR08 3092 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 LAMA2P24043 3122 aaKnown RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 LOC105371242A0A075B767 164 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PPIAL4CA0A0B4J2A2 164 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 MBLAC1A4D2B0 266 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms