RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 GFRALQ6UXV0 394 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 RETREG3Q86VR2 466 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 SLC30A8Q8IWU4 369 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 MSRB3Q8IXL7 192 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 WDSUB1Q8N9V3 476 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 TOR1AIP2Q8NFQ8 470 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 OR4K17Q8NGC6 315 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 LRRC58Q96CX6 371 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 AURKBQ96GD4 344 aaPredicted RBP17.13■□□□□ 0.33
VPS33A-205ENST00000541169 GNRHR2Q96P88 292 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 THUMPD3Q9BV44 507 aaKnown RBP17.13■□□□□ 0.33
VPS33A-205ENST00000541169 TMEM38AQ9H6F2 299 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 ARMC7Q9H6L4 198 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 SLAMF8Q9P0V8 285 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 NINQ8N4C6 2090 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 LINC01387J3KSC0 135 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 SCO2O43819 266 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 EIF4E2O60573 245 aaKnown RBP17.12■□□□□ 0.33
VPS33A-205ENST00000541169 H6PDO95479 791 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 COX4I1P13073 169 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 ETFAP13804 333 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 SRD5A2P31213 254 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 RFC3P40938 356 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 CASP9P55211 416 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 SUMO3P55854 103 aaPredicted RBP17.12■□□□□ 0.33
VPS33A-205ENST00000541169 DSCR4P56555 118 aaPredicted RBP17.12■□□□□ 0.33
VPS33A-205ENST00000541169 RBBP4Q09028 425 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 GPR68Q15743 365 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 GTDC1Q4AE62 458 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 FAM91A1Q658Y4 838 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 REP15Q6BDI9 236 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 DESI1Q6ICB0 168 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 TYW3Q6IPR3 259 aaKnown RBP17.12■□□□□ 0.33
VPS33A-205ENST00000541169 SERPINA11Q86U17 422 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 MARCH3Q86UD3 253 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 PEX5LQ8IYB4 626 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 EID3Q8N140 333 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 CCDC197Q8NCU1 140 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 DUSP19Q8WTR2 217 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 SLC38A5Q8WUX1 472 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 CPPED1Q9BRF8 314 aaPredicted RBP17.12■□□□□ 0.33
VPS33A-205ENST00000541169 LDAHQ9H6V9 325 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 BCL2L10Q9HD36 194 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 FBXO34Q9NWN3 711 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 MKLN1Q9UL63 735 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 SLC35A3Q9Y2D2 325 aa17.12■□□□□ 0.33
VPS33A-205ENST00000541169 SHANK1Q9Y566 2161 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 A0A087WZY1 265 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 C5orf58C9J3I9 102 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 GNB5O14775 395 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 FCMRO60667 390 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 TNFRSF21O75509 655 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 DBIP07108 87 aaKnown RBP17.11■□□□□ 0.33
VPS33A-205ENST00000541169 MNAT1P51948 309 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 GCNT6Q5T4J0 391 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 HACD2Q6Y1H2 254 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 FRRS1Q6ZNA5 592 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 EIF3MQ7L2H7 374 aaKnown RBP17.11■□□□□ 0.33
VPS33A-205ENST00000541169 ZAR1Q86SH2 424 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 FADS6Q8N9I5 356 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 SARAFQ96BY9 339 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 HOPXQ9BPY8 73 aaPredicted RBP17.11■□□□□ 0.33
VPS33A-205ENST00000541169 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.11■□□□□ 0.33
VPS33A-205ENST00000541169 STOML1Q9UBI4 398 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF232Q9UNY5 417 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF462Q96JM2 2506 aa17.11■□□□□ 0.33
VPS33A-205ENST00000541169 TRGV5A0A0B4J1U4 118 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 AGAP5A6NIR3 686 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 FAM47E-STBD1D6RA91 191 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 GTPBP1O00178 669 aaKnown RBP17.1■□□□□ 0.33
VPS33A-205ENST00000541169 AQP7O14520 342 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 BCKDKO14874 412 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 UGT2B17O75795 530 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 TRAPPC6AO75865 159 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 ETS2P15036 469 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 SLC6A2P23975 617 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 FUT5Q11128 374 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 ART3Q13508 389 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 TOMM20Q15388 145 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.33
VPS33A-205ENST00000541169 SYPL1Q16563 259 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 NANOGP8Q6NSW7 305 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 REEP3Q6NUK4 255 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 TRILQ7L0X0 811 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 GALNT10Q86SR1 603 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 KRT73Q86Y46 540 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 C11orf65Q8NCR3 313 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 BBS10Q8TAM1 723 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 NEIL3Q8TAT5 605 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 TREX2Q9BQ50 279 aaPredicted RBP17.1■□□□□ 0.33
VPS33A-205ENST00000541169 SPATA5L1Q9BVQ7 753 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 OR2B2Q9GZK3 357 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 DEFB127Q9H1M4 99 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 SLC38A1Q9H2H9 487 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 EXO5Q9H790 373 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 KAT8Q9H7Z6 458 aaKnown RBP17.1■□□□□ 0.33
VPS33A-205ENST00000541169 NANOGQ9H9S0 305 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 FLRT3Q9NZU0 649 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 DKKL1Q9UK85 242 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms