RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MAMDC2Q7Z304 686 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 IFNEQ86WN2 208 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 RNF130Q86XS8 419 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 PM20D2Q8IYS1 436 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF808Q8N4W9 903 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF614Q8N883 585 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF527Q8NB42 609 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 CHDHQ8NE62 594 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 PNPT1Q8TCS8 783 aaKnown RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 MIPOL1Q8TD10 442 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 PHF10Q8WUB8 498 aaKnown RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 RND1Q92730 232 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 RAB8BQ92930 207 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 C1GALT1C1Q96EU7 318 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 SH3YL1Q96HL8 342 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ITCHQ96J02 903 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 SFXN2Q96NB2 322 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 SDF2Q99470 211 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 TTYH2Q9BSA4 534 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 UGT2B28Q9BY64 529 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 HOXD1Q9GZZ0 328 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 RMND5AQ9H871 391 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 SLC6A13Q9NSD5 602 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 EXD2Q9NVH0 621 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 COQ3Q9NZJ6 369 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 CCDC167Q9P0B6 97 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 CAMK2AQ9UQM7 478 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 FAM215AQ9Y5M1 114 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 HIVEP3Q5T1R4 2406 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 USP9XQ93008 2570 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 IGLV3-32A0A0A0MS00 114 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 AHRRA9YTQ3 701 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 H3BNH8 94 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 NR5A2O00482 541 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 ATP8B1O43520 1251 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 HCRTR2O43614 444 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 FCMRO60667 390 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 STX11O75558 287 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 AGR2O95994 175 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 ACTL6AO96019 429 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 AK1P00568 194 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 VIMP08670 466 aaKnown RBP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 HOXD4P09016 255 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 HK1P19367 917 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 COL8A1P27658 744 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 MRPL19P49406 292 aaKnown RBP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 STARP49675 285 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 ATP12AP54707 1039 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 GFRA1P56159 465 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 NUP107P57740 925 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 GUCY1A3Q02108 690 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 SRYQ05066 204 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 SF3A3Q12874 501 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 RCAN2Q14206 197 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 GANABQ14697 944 aaKnown RBP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 GPR68Q15743 365 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 CD226Q15762 336 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 ARHGAP11BQ3KRB8 267 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 AGKQ53H12 422 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 KLHL26Q53HC5 615 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 C1orf185Q5T7R7 199 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 RTL6Q6ICC9 239 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 AAGABQ6PD74 315 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 SLC2A7Q6PXP3 512 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 ENPP6Q6UWR7 440 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 ARSKQ6UWY0 536 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 MSANTD1Q6ZTZ1 278 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 ULK2Q8IYT8 1036 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 OR5M1Q8NGP8 315 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 OR10Q1Q8NGQ4 319 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 PHOSPHO1Q8TCT1 267 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 CA5BP1Q8WTZ4 195 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 SDCCAG3Q96C92 435 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 WDYHV1Q96HA8 205 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 SIKE1Q9BRV8 207 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 PRDM14Q9GZV8 571 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 HHATLQ9HCP6 504 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 FGFR1OP2Q9NVK5 253 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 MKLN1Q9UL63 735 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 TRIM33Q9UPN9 1127 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 VDAC3Q9Y277 283 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 MRPS18CQ9Y3D5 142 aaKnown RBP8.37□□□□□ -1.07
SNHG1-215ENST00000540904 NINQ8N4C6 2090 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 EXPH5Q8NEV8 1989 aa8.37□□□□□ -1.07
SNHG1-215ENST00000540904 DOPEY2Q9Y3R5 2298 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 A0A1W2PQD3 144 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 KDM4EB2RXH2 506 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 PRSS44E7EML9 344 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 GTPBP1O00178 669 aaKnown RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 HMGN4O00479 90 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 KRT75O95678 551 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 GLI4P10075 376 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 TROVE2P10155 538 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 CPN1P15169 458 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 AGAP20933 346 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 CHMP24386 653 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 PTGER4P35408 488 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 CRATP43155 626 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ANXA11P50995 505 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms