RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CASP3P42574 277 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 NR1H2P55055 460 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 DIO3P55073 304 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 MANFP55145 182 aaKnown RBP13.53□□□□□ -0.24
USB1-203ENST00000539737 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 PLCXD2Q0VAA5 305 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 MLC1Q15049 377 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 DPY19L1Q2PZI1 675 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 ANGPTL8Q6UXH0 198 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 ZNF551Q7Z340 670 aaPredicted RBP13.53□□□□□ -0.24
USB1-203ENST00000539737 NUP54Q7Z3B4 507 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 YTHDF3Q7Z739 585 aaKnown RBP13.53□□□□□ -0.24
USB1-203ENST00000539737 KIF18BQ86Y91 864 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 RIMKLAQ8IXN7 391 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 OR7A2PQ8NGA2 310 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 OR1J4Q8NGS1 313 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 ACTRT2Q8TDY3 377 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 ELP4Q96EB1 424 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 LCORQ96JN0 433 aaPredicted RBP13.53□□□□□ -0.24
USB1-203ENST00000539737 BTBD9Q96Q07 612 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 ANGPTL4Q9BY76 406 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 DPY30Q9C005 99 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 FOLH1BQ9HBA9 442 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 SERHLQ9NQF3 203 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 AIG1Q9NVV5 245 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 KLRF1Q9NZS2 232 aa13.53□□□□□ -0.24
USB1-203ENST00000539737 C19orf53Q9UNZ5 99 aaPredicted RBP13.53□□□□□ -0.24
USB1-203ENST00000539737 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.24
USB1-203ENST00000539737 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 DEFB108AA8MXU0 73 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 SMPD2O60906 423 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
USB1-203ENST00000539737 PPM1BO75688 479 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 PSMG1O95456 288 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 LAMP1P11279 417 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 DRD5P21918 477 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 PEX19P40855 299 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 PPICP45877 212 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 SORDQ00796 357 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 ZNHIT3Q15649 155 aaPredicted RBP13.52□□□□□ -0.25
USB1-203ENST00000539737 NXNQ6DKJ4 435 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 C22orf34Q6ZV56 151 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 ZNF550Q7Z398 422 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 COQ8BQ96D53 544 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 TMCO6Q96DC7 493 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 PIK3IP1Q96FE7 263 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 TMEM41AQ96HV5 264 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 VSTM2LQ96N03 204 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 MS4A4EQ96PG1 132 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 DUSP26Q9BV47 211 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 NXF5Q9H1B4 397 aaKnown RBP13.52□□□□□ -0.25
USB1-203ENST00000539737 WDR55Q9H6Y2 383 aaPredicted RBP13.52□□□□□ -0.25
USB1-203ENST00000539737 FOXD3Q9UJU5 478 aaPredicted RBP13.52□□□□□ -0.25
USB1-203ENST00000539737 DSCAMO60469 2012 aa13.52□□□□□ -0.25
USB1-203ENST00000539737 A0A1W2PRB8 838 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 TTC36A6NLP5 189 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 B4DXG7 233 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 H0Y3Z8 333 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 UPK1AO00322 258 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 TO15178 435 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 ABCB7O75027 752 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 TGM6O95932 706 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 ALDOCP09972 364 aaKnown RBP13.51□□□□□ -0.25
USB1-203ENST00000539737 IDO1P14902 403 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 OPRM1P35372 400 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 PTGDSP41222 190 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 MRPS22P82650 360 aaKnown RBP13.51□□□□□ -0.25
USB1-203ENST00000539737 PRR5P85299 388 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 SNTA1Q13424 505 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 LSM12Q3MHD2 195 aaKnown RBP13.51□□□□□ -0.25
USB1-203ENST00000539737 SLC9B1Q4ZJI4 515 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 SHEQ5VZ18 495 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 SLC30A6Q6NXT4 461 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 CXXC5Q7LFL8 322 aaKnown RBP13.51□□□□□ -0.25
USB1-203ENST00000539737 MAVSQ7Z434 540 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 MAPK1IP1LQ8NDC0 245 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 CEP70Q8NHQ1 597 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 OR5P2Q8WZ92 322 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 TESCQ96BS2 214 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 OMA1Q96E52 524 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 ZC3HAV1LQ96H79 300 aaKnown RBP13.51□□□□□ -0.25
USB1-203ENST00000539737 WFIKKN1Q96NZ8 548 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 ZBTB18Q99592 522 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 OSBPL11Q9BXB4 747 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 ANKRA2Q9H9E1 313 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 C3orf14Q9HBI5 128 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 GPR55Q9Y2T6 319 aaPredicted RBP13.51□□□□□ -0.25
USB1-203ENST00000539737 TESMINQ9Y4I5 508 aa13.51□□□□□ -0.25
USB1-203ENST00000539737 E9PBE3 544 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 ZNF195O14628 629 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 POLR3GO15318 223 aaPredicted RBP13.5□□□□□ -0.25
USB1-203ENST00000539737 REM1O75628 298 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
USB1-203ENST00000539737 CYP4B1P13584 511 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 IL12BP29460 328 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 CCKARP32238 428 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms