RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 IGSF21Q96ID5 467 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TSG101Q99816 390 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 MACROD1Q9BQ69 325 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 NDUFAF3Q9BU61 184 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ST6GALNAC5Q9BVH7 336 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 C1QTNF7Q9BXJ2 289 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PARD6BQ9BYG5 372 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TM6SF2Q9BZW4 377 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 NDEL1Q9GZM8 345 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ROGDIQ9GZN7 287 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 RAB1BQ9H0U4 201 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 KCNN2Q9H2S1 579 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ACTL8Q9H568 366 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 C10orf88Q9H8K7 445 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 UBTD1Q9HAC8 227 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PNRC2Q9NPJ4 139 aaKnown RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 NKIRAS1Q9NYS0 192 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 LHX3Q9UBR4 397 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PLEKHB1Q9UF11 243 aaPredicted RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 CYTH4Q9UIA0 394 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 WDR83OSQ9Y284 106 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 USP42Q9H9J4 1324 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 JMJD1CQ15652 2540 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CCDC168Q8NDH2 2452 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 DOPEY2Q9Y3R5 2298 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 TRAV18A0A075B6X5 111 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 A0A1B0GVL5 298 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FRG2CA6NGY1 282 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 TMEM210A6NLX4 147 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 HHLA1C9JL84 531 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FAM90A26D6RGX4 464 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 H0YHG0 523 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 I6L893 689 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 HSPB6O14558 160 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 DVL1O14640 695 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 RRHO14718 337 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SPINT2O43291 252 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SYT7O43581 403 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 TPST2O60704 377 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 RBMXL2O75526 392 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CDC123O75794 336 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 AHSA1O95433 338 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 WDPCPO95876 746 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 EPOP01588 193 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SMIM18P0DKX4 95 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 NQO2P16083 231 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 TNNI1P19237 187 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 POLR2CP19387 275 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SRD5A2P31213 254 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CASP14P31944 242 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CYLC1P35663 651 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CASP4P49662 377 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 NDST2P52849 883 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CTSCP53634 463 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 LIMK2P53671 638 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CDH12P55289 794 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MAZP56270 477 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 TMPRSS3P57727 454 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 VBP1P61758 197 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 PSMC5P62195 406 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 PPIAP62937 165 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 PHEXP78562 749 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CDH17Q12864 832 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FADDQ13158 208 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ITGB3BPQ13352 177 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CDH18Q13634 790 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF268Q14587 947 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 EXOSC7Q15024 291 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 NONOQ15233 471 aaKnown RBP eCLIP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MAPRE2Q15555 327 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ETFDHQ16134 617 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 EIF2S3LQ2VIR3 472 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ENTPD8Q5MY95 495 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 EOGTQ5NDL2 527 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SAPCD1Q5SSQ6 148 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 OR2A2Q6IF42 318 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 H3F3CQ6NXT2 135 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FUT10Q6P4F1 479 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FAM173BQ6P4H8 233 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 KCNIP4Q6PIL6 250 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FAM57BQ71RH2 274 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 H2BFWTQ7Z2G1 175 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 DPY19L4Q7Z388 723 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 GOLGA7Q7Z5G4 137 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CPEB2Q7Z5Q1 589 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SNX20Q7Z614 316 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 PATL1Q86TB9 770 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 LRRC8AQ8IWT6 810 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MB21D2Q8IYB1 491 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 NAGSQ8N159 534 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MUC20Q8N307 709 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 C17orf78Q8N4C9 275 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 TMEM99Q8N816 258 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF548Q8NEK5 533 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 OR6M1Q8NGM8 313 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 OR14A16Q8NHC5 309 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MARCH1Q8TCQ1 289 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SLC35F5Q8WV83 523 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ASB5Q8WWX0 329 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FAM3CQ92520 227 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms