RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 HYAL3O43820 417 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 PROS1P07225 676 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 FGF2P09038 288 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 PAICSP22234 425 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 SLC11A1P49279 550 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 PRLHRP49683 370 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 B2MP61769 119 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 GNA13Q14344 377 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 METTL11BQ5VVY1 283 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 LRFN4Q6PJG9 635 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 ARL9Q6T311 187 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 BAIAP2L2Q6UXY1 529 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 Q6ZNB5 142 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 OLIG3Q7RTU3 272 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 TAS1R1Q7RTX1 841 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 CEACAM19Q7Z692 300 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 HMGN2P46Q86SG4 172 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 GJD3Q8N144 294 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 NR4A3Q92570 626 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 SIPA1Q96FS4 1042 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 TIMP4Q99727 224 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 CHIAQ9BZP6 476 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 KLHL1Q9NR64 748 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 CLEC4AQ9UMR7 237 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 ITGA10O75578 1167 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 B3GALNT1O75752 331 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 FPR3P25089 353 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 CD70P32970 193 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 STAT5AP42229 794 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 TAF12Q16514 161 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 C22orf39Q6P5X5 142 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 Q6ZTK2 550 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 SZRD1Q7Z422 152 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 HSD11B1LQ7Z5J1 315 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 LMNTD1Q8N9Z9 388 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 FAM98AQ8NCA5 519 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 FAM71CQ8NEG0 241 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 OR11G2Q8NGC1 345 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 EXOSC8Q96B26 276 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 HINT3Q9NQE9 182 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 CAMK2AQ9UQM7 478 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 A0A1B0GUH1 482 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 SERPIND1P05546 499 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 LPLP06858 475 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 RAB3AP20336 220 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 NFYAP23511 347 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 CTSOP43234 321 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 FAM69AQ5T7M9 428 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 Q6ZVL8 140 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 PXKQ7Z7A4 578 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 CPOQ8IVL8 374 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 SPICQ8N5J4 248 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 TRAM1L1Q8N609 369 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 BVESQ8NE79 360 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 SMIM4Q8WVI0 70 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 TMPRSS13Q9BYE2 586 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 PCDHB16Q9NRJ7 776 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 CREBZFQ9NS37 354 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 ATPIF1Q9UII2 106 aa17.36■□□□□ 0.37
SFSWAP-207ENST00000538548 CTDSPLO15194 276 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 PLPP2O43688 288 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 SLC2A10O95528 541 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 HMGN1P05114 100 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 GIPP09681 153 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 SAGP10523 405 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 XPAP23025 273 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 CAMK1Q14012 370 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 CXXC5Q7LFL8 322 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 ANKRD53Q8N9V6 530 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 TTLQ8NG68 377 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 SUN3Q8TAQ9 357 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 ABHD4Q8TB40 342 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 SCARB1Q8WTV0 552 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 THAP4Q8WY91 577 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 SLC22A12Q96S37 553 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 PINK1Q9BXM7 581 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 MCCC2Q9HCC0 563 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 PIPOXQ9P0Z9 390 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 CHRM4P08173 479 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 RAB3BP20337 219 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 TBXA2RP21731 343 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 POLR2LP62875 67 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 B3GNTL1Q67FW5 361 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 SLC8B1Q6J4K2 584 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 GID4Q8IVV7 300 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 OR2T33Q8NG76 320 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 SORCS1Q8WY21 1168 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 RIOK2Q9BVS4 552 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 GSDMCQ9BYG8 508 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 NANSQ9NR45 359 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 ACSS1Q9NUB1 689 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 ABRACLQ9P1F3 81 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 FLVCR2Q9UPI3 526 aa17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 NUP210Q8TEM1 1887 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-207ENST00000538548 AIPO00170 330 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 RTCAO00442 366 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 RPL17P18621 184 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 PSMB1P20618 241 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CALCRP30988 508 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 OR1D2P34982 312 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms