RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	PTGR1	Q14914	329 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	KIAA0040	Q15053	153 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	PDK3	Q15120	406 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	TRIP10	Q15642	601 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ST3GAL2	Q16842	350 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	BTBD16	Q32M84	506 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	GFOD2	Q3B7J2	385 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	BEAN1	Q3B7T3	259 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	GRAMD1B	Q3KR37	738 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	SLC9B1	Q4ZJI4	515 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	SFT2D3	Q587I9	215 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	KHDC1L	Q5JSQ8	128 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	CPTP	Q5TA50	214 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	OGFRL1	Q5TC84	451 aa	Predicted RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	IGFL4	Q6B9Z1	124 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	SLC48A1	Q6P1K1	146 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	CRIP3	Q6Q6R5	217 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	EPGN	Q6UW88	154 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	C16orf89	Q6UX73	402 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	LANCL3	Q6ZV70	420 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	MAVS	Q7Z434	540 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	CPEB2	Q7Z5Q1	589 aa	Known RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	PPP1R32	Q7Z5V6	425 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ANKRD37	Q7Z713	158 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	SPATA24	Q86W54	205 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	TICAM1	Q8IUC6	712 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	LRRC25	Q8N386	305 aa	Predicted RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	MARVELD2	Q8N4S9	558 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ZBTB34	Q8NCN2	500 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ICA1L	Q8NDH6	482 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	CPEB3	Q8NE35	698 aa	Known RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	OR4K14	Q8NGD5	310 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	SLC26A7	Q8TE54	656 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	PYDC1	Q8WXC3	89 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	DAZL	Q92904	295 aa	Known RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	RIT1	Q92963	219 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	TSLP	Q969D9	159 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	EXOSC8	Q96B26	276 aa	Known RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	TM4SF18	Q96CE8	201 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	MTERF3	Q96E29	417 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	C11orf24	Q96F05	449 aa	Predicted RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ART5	Q96L15	291 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	FER1L6-AS2	Q96M78	137 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	CATSPER2	Q96P56	530 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	DGAT2	Q96PD7	388 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	BBS4	Q96RK4	519 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	LPAR4	Q99677	370 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ALOXE3	Q9BYJ1	711 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	DPY30	Q9C005	99 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	REEP4	Q9H6H4	257 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	CPNE5	Q9HCH3	593 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ADAP2	Q9NPF8	381 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	SLC35C2	Q9NQQ7	365 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	PNO1	Q9NRX1	252 aa	Known RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	MRGBP	Q9NV56	204 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	AIG1	Q9NVV5	245 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	P4HTM	Q9NXG6	502 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	ASIC5	Q9NY37	505 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	EHD3	Q9NZN3	535 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	SH3BP4	Q9P0V3	963 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	COPS7A	Q9UBW8	275 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	GIMAP2	Q9UG22	337 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	FBXL4	Q9UKA2	621 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	PRPF19	Q9UMS4	504 aa	Known RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	NOX1	Q9Y5S8	564 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	MRPS18B	Q9Y676	258 aa	Known RBP	4	□□□□□ -1.77
SNHG1-208	ENST00000538266	DMXL1	Q9Y485	3027 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	CFAP54	Q96N23	3096 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	WDR87	Q6ZQQ6	2873 aa		4	□□□□□ -1.77
SNHG1-208	ENST00000538266	AHCTF1	Q8WYP5	2266 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	IGKV3D-11	A0A0A0MRZ8	115 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	IGHV1-45	A0A0A0MS14	117 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	IGHV3-20	A0A0C4DH32	117 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	OR2W5	A6NFC9	320 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	TMEM200C	A6NKL6	621 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266		A8MUA0	341 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	C17orf105	B2RV13	164 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266		K7ENP7	123 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	SOCS6	O14544	535 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	ZNF195	O14628	629 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	SCAMP2	O15127	329 aa	Known RBP	3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	PGRMC2	O15173	223 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	CFLAR	O15519	480 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	NKX2-8	O15522	239 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	SLC22A3	O75751	556 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	TUSC2	O75896	110 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	PDE5A	O76074	875 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	HP	P00738	406 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	FSHB	P01225	129 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	ATP1B1	P05026	303 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	ALPP	P05187	535 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	SLC35E2	P0CK97	266 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	SMIM18	P0DKX4	95 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	COX6A1	P12074	109 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	ICAM2	P13598	275 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	POR	P16435	677 aa	Predicted RBP	3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	NT5E	P21589	574 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	ITGA3	P26006	1051 aa		3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	ZFP36	P26651	326 aa	Known RBP	3.99	□□□□□ -1.77
SNHG1-208	ENST00000538266	ITPKB	P27987	946 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms