RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 SCGB2A1O75556 95 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 PRKRAO75569 313 aaKnown RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 OXSR1O95747 527 aaPredicted RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 FUT1P19526 365 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 HLA-FP30511 346 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 CSNK1A1P48729 337 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 ART1P52961 327 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 LILRB2Q8N423 598 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 L3HYPDHQ96EM0 354 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 C16orf58Q96GQ5 468 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 R3HDMLQ9H3Y0 253 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 CBLCQ9ULV8 474 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 TMEM14AQ9Y6G1 99 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 AGAP5A6NIR3 686 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 KDM4EB2RXH2 506 aaPredicted RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 CHRM4P08173 479 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TNFSF4P23510 183 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PTH2RP49190 550 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 SERTAD2Q14140 314 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TUBA3EQ6PEY2 450 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 DEFB123Q8N688 67 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 OR5M1Q8NGP8 315 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PEX13Q92968 403 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 INSM2Q96T92 566 aaPredicted RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TMEM184BQ9Y519 407 aaPredicted RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 AP1M2Q9Y6Q5 423 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TOGARAM1Q9Y4F4 1720 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PLSCR5A0PG75 271 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 C2orf72A6NCS6 295 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 C1orf105O95561 183 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PET100P0DJ07 73 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 DDCP20711 480 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 ANKRD54Q6NXT1 300 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 LRRN1Q6UXK5 716 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 MEX3BQ6ZN04 569 aaKnown RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TEX26Q8N6G2 289 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TSPEARQ8WU66 669 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 YTHDF1Q9BYJ9 559 aaKnown RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 CXCL16Q9H2A7 254 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PLEKHJ1Q9NW61 149 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 AMY2AP04746 511 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 GSTT2P0CG29 244 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 SERPINA2P20848 420 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 HOXD9P28356 352 aaPredicted RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 CCR7P32248 378 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 OR1D5P58170 312 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TUBA3CQ13748 450 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TBRG1Q3YBR2 411 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 C15orf39Q6ZRI6 1047 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 LANCL3Q6ZV70 420 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TMEM135Q86UB9 458 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PIGCQ92535 297 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 FKBP10Q96AY3 582 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 CDC6Q99741 560 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 C12orf49Q9H741 205 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 CALHM2Q9HA72 323 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF443Q9Y2A4 671 aaPredicted RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 J3KTA2 159 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 AP1G1O43747 822 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 LIPCP11150 499 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 UGT2B7P16662 529 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 NFATC4Q14934 902 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 RPE65Q16518 533 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 TMIEQ8NEW7 156 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 FAM234AQ9H0X4 552 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PAK1IP1Q9NWT1 392 aaPredicted RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PCDHA9Q9Y5H5 950 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 I3L521 148 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PHYHO14832 338 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 ENSAO43768 121 aaKnown RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 MPIG6BO95866 241 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 YES1P07947 543 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 CD46P15529 392 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 RGRP47804 291 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 RBPJQ06330 500 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 EFR3AQ14156 821 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 COL28A1Q2UY09 1125 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 RFLNAQ6ZTI6 216 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 PIANPQ8IYJ0 282 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 OR7G3Q8NG95 312 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 OR5W2Q8NH69 310 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 GRPEL2Q8TAA5 225 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 RSC1A1Q92681 617 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
LINC00346-201ENST00000538077 MOV10Q9HCE1 1003 aaKnown RBP10.54□□□□□ -0.72
LINC00346-201ENST00000538077 ARGFXA6NJG6 315 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 IDUAP35475 653 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 PAGE3Q5JUK9 113 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 PGM2L1Q6PCE3 622 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 SERPINA12Q8IW75 414 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 SPAG16Q8N0X2 631 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
LINC00346-201ENST00000538077 HDAC2Q92769 488 aaKnown RBP10.53□□□□□ -0.72
LINC00346-201ENST00000538077 PREBQ9HCU5 417 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 CARD8Q9Y2G2 431 aa10.53□□□□□ -0.72
LINC00346-201ENST00000538077 AK6Q9Y3D8 172 aaKnown RBP10.53□□□□□ -0.72
LINC00346-201ENST00000538077 PCDHGA1Q9Y5H4 931 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms